Pairwise Alignments

Query, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 2e-63
 Identities = 144/432 (33%), Positives = 224/432 (51%), Gaps = 31/432 (7%)

Query: 9   LTALSLALGSAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDGESAAGNGYSEEWAHG 68
           L+A  LA  + P+ A ++    FI  S   L  RN Y NRDFR  +S A    +EEW  G
Sbjct: 14  LSAAWLATVALPMPALAD----FIGDSHARLELRNHYINRDFR--QSNAPQAKAEEWGQG 67

Query: 69  LMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLLPHD-SAGDPEDDFTRV 127
             A  ESG+T+G VG G DA   LG+KLDS   R   G    LLP   ++ +P DD++ +
Sbjct: 68  FTAKLESGFTEGPVGFGVDALGQLGIKLDSSRDRRNTG----LLPFGPNSHEPVDDYSEL 123

Query: 128 GGAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQGGRLHAM 187
           G   K R+  + ++ G + P  PVV + D+RLL  SF+G  + +  LD LT   GRL   
Sbjct: 124 GLTGKVRVSKSTLRLGTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKA 183

Query: 188 SQPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNENISLSLYTSRLKDAWNQHYFGASA 247
           +  ++S  ++       G   +  L + GG Y++    ++S Y ++L+D + Q + G   
Sbjct: 184 NLRDSSGRDD----IGYGAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLID 239

Query: 248 TYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGAHTVTASYQRNNGNND 307
           T PL++ V+L +   Y+ + ++G E  G  +N  +++   +   AH  TA++Q+ +G++ 
Sbjct: 240 TRPLAEGVSLRSDLRYFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSA 299

Query: 308 FDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGLTFMTRYARGWGADYS 367
           F ++   D  +  N + Y+ F      SW +RYD +    GIPGL+FMTRY  G  A+  
Sbjct: 300 FPFVNGGDP-FTVNLVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAE-- 356

Query: 368 NANEVYMRQDDNGAPLTGQNRWERDVEARYVVQTGSLKDLSLRVRQATTRA-TAFESDLD 426
                        A +T     ERD +  YV+Q+G  KD+SLR R  T R+     + +D
Sbjct: 357 ------------TATVTNGRERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVD 404

Query: 427 EVRFIAEYPLSI 438
           E R I  Y L++
Sbjct: 405 ENRLIIGYTLAL 416