Pairwise Alignments

Query, 483 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 423 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  272 bits (696), Expect = 1e-77
 Identities = 164/389 (42%), Positives = 222/389 (57%), Gaps = 13/389 (3%)

Query: 28  TAAFGQSPAEEDKEVLYWYDPMVPQQKFDKPGKSPFMDMELIPRYADEGS-DGASISIDP 86
           T+    + A   ++VLYWYD MVP+Q FD PG SP M M ++P+YAD+ S D   + IDP
Sbjct: 31  TSTPASASAGAQRKVLYWYDTMVPEQHFDHPGVSP-MGMPMVPKYADDSSIDKNVVHIDP 89

Query: 87  SVTQNLGVRFATVTRESISQSLEATGALMFDERDVAVVQARAGGFVERVYDRAPEDVIEK 146
           +  QNLGVR A V R  ++  L+  G + ++ RD   V AR    VE++  RAP   ++ 
Sbjct: 90  ATVQNLGVRTAPVVRRVLANQLQVPGTVSWNLRDAVTVSARVDATVEQLDVRAPYTTVKA 149

Query: 147 GAPLADLLVPEWVAAQEEYLALK---GIGEPQLLAAARQRLRLAGMPPEVIVQLERTGKA 203
           G PL +LL P+W +A  EY AL+         L AAARQRL++ G+  + I   ER G  
Sbjct: 150 GQPLVELLAPQWSSAISEYRALQHAHSADAQALRAAARQRLQVLGLTAQDIAS-ERGGHI 208

Query: 204 RPVWTVRSPIGGVLNSLDVREGMTVSTGASLARVNGLEKVWLEVAVPEAQVANVAPGQLV 263
               T+ +P GGV+ +LDVREG  V  G +L  +NGL  VW+E A+P+A    V  G  V
Sbjct: 209 ----TLHAPKGGVVTTLDVREGQQVGAGQTLMTLNGLSTVWVEAALPQAAAGTVRTGTPV 264

Query: 264 NARLPAFAGEVLEGTIQAVLPQANLDSRTVRVRVELPNPQQRLRPGMTAEVTLS-RNVED 322
             R  A  G+V  G ++A+LP  +  +RT R R+ LPNP   L PG    V L       
Sbjct: 265 TVRATALPGQVFRGQVEALLPDLDPMTRTQRARIVLPNPDHALSPGQFVTVELQPPPARP 324

Query: 323 VLVIPSEAVIRTGR-RALVMLAEDQGRYRPIEVRTGREFDDQTEVLEGLEAGQKVVASGQ 381
            LV+P  AVI TG     V++AE  G++RP+ VR GR     TE+L GL + ++VV SGQ
Sbjct: 325 ELVVPDGAVIATGSDTPRVIVAEGNGQFRPVAVRLGRSAGGDTEILAGLSSDERVVVSGQ 384

Query: 382 FLLDSEASLRG-LTAQGLEEPATSTEPAL 409
           FL+DSEASL G L      EPA +   A+
Sbjct: 385 FLIDSEASLSGALQRLQSSEPAHTASSAM 413