Pairwise Alignments

Query, 1054 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Pseudomonas stutzeri RCH2

Subject, 1054 a.a., Copper/silver efflux RND transporter, transmembrane protein CusA from Variovorax sp. SCN45

 Score = 1565 bits (4053), Expect = 0.0
 Identities = 782/1037 (75%), Positives = 899/1037 (86%), Gaps = 1/1037 (0%)

Query: 1    MIAAIIRWSVANRFLILLATVFAVAWGVWSVKNTAVDALPDLSDVQVIIRTPYPGQAPRI 60
            MIA +IRWS+ANRFL+LLAT    AWGV+SV  T +DALPDLSDVQVIIRT YPGQAPRI
Sbjct: 1    MIAKLIRWSIANRFLVLLATAMLSAWGVYSVLRTPLDALPDLSDVQVIIRTSYPGQAPRI 60

Query: 61   VENQVTYPLTTTMLSVPGAKTVRGYSFFGDSYVYVLFEDGTDLYWARSRVLEYLSQVQSR 120
            VENQ+TYPLTTTMLSVPGAKTVRGYSFFGDS+VYVLFEDGTDLYWARSRVLEYL+QVQSR
Sbjct: 61   VENQITYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQSR 120

Query: 121  LPAAAKPALGPDATGVGWIYQYALVDRTGKHDLSQLRSLQDWFLRYELKTLPNVAEVAPI 180
            LPAAAK +LGPDATGVGWIYQYALVDR G  D SQLR+LQDWFL+YELKT+PNVAEVA I
Sbjct: 121  LPAAAKASLGPDATGVGWIYQYALVDRGGTQDASQLRALQDWFLKYELKTVPNVAEVASI 180

Query: 181  GGMVKQYQVVLDPVRMASRGVTQQQIAKAIDEANRETGGSVLELAETEFMVRATGYLKTL 240
            GGMV+QYQVVLDP ++A+  +   +  +AI +AN+ETGGSVLEL E E+MVRA+GYL+ L
Sbjct: 181  GGMVRQYQVVLDPEKLAAYRIPHTKAVEAIQKANQETGGSVLELGEAEYMVRASGYLQGL 240

Query: 241  KDFRAIPLRL-DGGVPVTLGDVAHIQLGPEMRRGISELDGEGEVVGGVVILRSGKNARET 299
            +DFR IPL   D GV V LGDVA IQ+GPEMRRGI ELDGEGE VGGV+++RSGKNA ET
Sbjct: 241  EDFRKIPLMTTDAGVSVRLGDVARIQVGPEMRRGIGELDGEGEAVGGVIVMRSGKNALET 300

Query: 300  IAAVQTKLDELKASLPQGVEIVTTYDRSKLIDSAVENLTHKLIEEFIVVALVCAIFLWHL 359
            I AV+ KL  L+ASLP+GVEIV TYDRS LI+ AV NL  KL+EEFIVVA+VC IFL+HL
Sbjct: 301  ITAVKEKLQTLQASLPKGVEIVPTYDRSNLIERAVRNLGFKLLEEFIVVAVVCFIFLFHL 360

Query: 360  RSSLVAIVSLPIGILIAFVIMQRQGINANIMSLGGIAIAIGAMVDAAIVMIENAHKHIEA 419
            RS+ VAIVSLPIGIL AF++M+ QG+NANIMSLGGIAIAIGAMVDAA+VMIENAHKHIE 
Sbjct: 361  RSAFVAIVSLPIGILAAFIVMRYQGVNANIMSLGGIAIAIGAMVDAAVVMIENAHKHIEK 420

Query: 420  WHKRHPDSTLKGQEHWKVITDAAVEVGPALFFSLLIITLSFIPVFTLEAQEGRLFGPLAF 479
            W   HPD TL+G+ HW+VI D+A EVGPALFFSLLIITLSFIPVFTLEAQEGR+F PLAF
Sbjct: 421  WKHDHPDQTLRGETHWRVIADSAAEVGPALFFSLLIITLSFIPVFTLEAQEGRMFSPLAF 480

Query: 480  TKTYAMAAAAGLSVTLVPVLMGYWIRGKIPDEHRNPLNRGLIWIYKPALDAVLRWPKMTL 539
            TKTYAMAAAAGLSVTL+PVLMGY IRG+IPDE  NPLNR LI +Y+P L+AVLRWPK+TL
Sbjct: 481  TKTYAMAAAAGLSVTLIPVLMGYLIRGRIPDEKTNPLNRLLIAVYQPLLNAVLRWPKLTL 540

Query: 540  LVAVLVFLTGLWPASRLGGEFLPPLDEGDLLYMPTALPGLSAQKASELLQQTDRLIKTVP 599
              A +V +  LWP   +GGEF+P LDEGDLLYMP+ALPGLS  KA ELLQQTDRLIKTVP
Sbjct: 541  AGAAVVLVLSLWPLQHIGGEFMPRLDEGDLLYMPSALPGLSTGKAGELLQQTDRLIKTVP 600

Query: 600  EVAHVFGKAGRADTATDPAPLEMFETTIQFKPKDQWRPGMTPDKLVEELDRTVQVPGLAN 659
            EVA V+GKAGRA++ATDPAP+EMFETTIQFKP++QWR GMT DKLVEELDR V+VPGL N
Sbjct: 601  EVASVYGKAGRAESATDPAPIEMFETTIQFKPREQWRAGMTQDKLVEELDRIVKVPGLTN 660

Query: 660  LWIPPIRNRIDMLATGIKSPIGVKVYGTDLAQIDKATQAVEKIAKTVPGVSSALAERLTG 719
            +W+PPIRNRIDMLATGIKSP+GVKV GTDLA ID+ T  +E++ K VPGVSSALAERLTG
Sbjct: 661  IWVPPIRNRIDMLATGIKSPVGVKVAGTDLATIDRITGEIERVLKDVPGVSSALAERLTG 720

Query: 720  GRYIDVDIDRVAAARYGLNIADVQSIVAGAIGGQTIGETVEGLARYPINLRYGREWRDSI 779
            GRY+DV+I R  A+R+G+NIADVQS++A A+GG+ IGETVEGL R+PIN+RY RE RDS+
Sbjct: 721  GRYVDVNIKRDEASRFGMNIADVQSVIASAVGGENIGETVEGLQRFPINVRYPREIRDSL 780

Query: 780  SDLRNLPIYTPQGSQITLGTVAKVQVTDGPPMLKSENARLSGWVYVDVRGRDMAAVVGDL 839
              LR+LPI T +G+++ L  VA +++TDGPPML+SENARLSGWVYVD+RGRD+ + V D+
Sbjct: 781  EQLRSLPIVTERGARLVLSDVADIRITDGPPMLRSENARLSGWVYVDIRGRDLRSAVQDM 840

Query: 840  REKISKGVQLESGMSISYSGQFEFMERANAKLKLVVPATLLIIFVLLYLTFGRFGEALLI 899
            +  ++K V+L  G ++S+SGQFEF+ERA AKLK+VVP TLLIIFVLLYLTF RF EALLI
Sbjct: 841  QRVVTKEVKLPPGYAVSWSGQFEFLERATAKLKVVVPFTLLIIFVLLYLTFKRFDEALLI 900

Query: 900  MATLPFALTGGVWFLYLLGYNLSVATGIGFIALAGVSAEFGVIMLLYLKNAWTDRVNAGA 959
            MA LPFAL GG+W LYLL YNLSVA  +GFIALAGVSAEFGVIMLLYLK+AW +RV+ G 
Sbjct: 901  MAALPFALVGGIWLLYLLSYNLSVAGAVGFIALAGVSAEFGVIMLLYLKHAWDERVDEGK 960

Query: 960  HGEGVLLDAIREGAVQRVRPKAMTVAVIIAGLLPILWGSGTGSEIMSRIAAPMVGGMITA 1019
                 LLDAIREGAV RVRPKAMTVAVI+AGL PI+WG+GTGSE+M RIAAPMVGGMITA
Sbjct: 961  TSTADLLDAIREGAVLRVRPKAMTVAVILAGLFPIMWGTGTGSEVMQRIAAPMVGGMITA 1020

Query: 1020 PLLSLFVLPAAYLLMRR 1036
            PLLS+FV+PAAYLLMRR
Sbjct: 1021 PLLSMFVIPAAYLLMRR 1037