Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 231 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Pectobacterium carotovorum WPP14

 Score = 98.6 bits (244), Expect = 8e-26
 Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 25/185 (13%)

Query: 30  PRLLLLNKPFDVLTQFNDADGRATLKDFVDVPGVYP---AGRLDRDSEGLLLLTNDGQLQ 86
           PR  +LNKP   +   +D D   T+  F+DVP  Y    AGRLD D+ GL+LLT+DGQ  
Sbjct: 60  PRYFMLNKPQGYVCSTDDPD-HPTILYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQWS 118

Query: 87  ARIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELND--GMTLPAEARQLEEPELWPRN 144
            RI  PKH+  KTY V +E  ++ +   +   GV+L++   +T PA   ++ +       
Sbjct: 119 HRITSPKHQCEKTYLVTLEQPLAEDTAAQFTAGVQLHNEKNLTKPATLEKITD------- 171

Query: 145 PPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGG-LQPGEWR 203
                        + L I EGR  QV+RM AAVG   + L R RIG   L   L+PGE+R
Sbjct: 172 -----------YVVRLTISEGRYHQVKRMFAAVGNRVVELHRERIGGIYLDSELEPGEYR 220

Query: 204 EVPAQ 208
           E+ A+
Sbjct: 221 ELSAE 225