Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 294 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Pectobacterium carotovorum WPP14

 Score =  101 bits (252), Expect = 1e-26
 Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 20/183 (10%)

Query: 31  RLLLLNKPFDVLTQFNDADGRATLKDFVD-VPGV--YPAGRLDRDSEGLLLLTNDGQLQA 87
           R+L+  KP   L   ND DGR T+ D +  + G      GRLD ++ GLLL T DG+L  
Sbjct: 68  RVLMYYKPEGELCTRNDPDGRPTVFDRLPKIQGSRWVAVGRLDVNTSGLLLFTTDGELAN 127

Query: 88  RIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLEEPELWPRNPPV 147
           R+  P  ++ + Y V+V GEV  E++++L  GV+L DG   PA  R             +
Sbjct: 128 RLMHPSREVEREYAVRVFGEVDDEKIKQLSKGVQLEDG---PASFR------------TI 172

Query: 148 RFRKSVP-TSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTL-GGLQPGEWREV 205
           R++       W  + + EGRNR+VRR+  AVG+   RL+RVR G  TL  G+  G W E+
Sbjct: 173 RYQGGEGLNQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDITLPKGIPRGGWTEM 232

Query: 206 PAQ 208
           P +
Sbjct: 233 PLE 235