Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 208 a.a., 23S rRNA pseudouridine(2457) synthase RluE from Serratia liquefaciens MT49

 Score =  223 bits (569), Expect = 2e-63
 Identities = 113/202 (55%), Positives = 140/202 (69%), Gaps = 12/202 (5%)

Query: 3   RISRPHPPRAAAARTPSRRVAKAPPAEPRLLLLNKPFDVLTQFNDADGRATLKDFVDVPG 62
           R S+P P + A A+ P R           ++L NKPFDVL QF D  GR TLK+F+  P 
Sbjct: 13  RFSKPAPAKPAVAQGPRR-----------VVLFNKPFDVLPQFTDEAGRTTLKEFIPFPD 61

Query: 63  VYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVEL 122
           VY AGRLDRDSEGLL+LTNDG+LQA++  P  +  K Y+VQVEG      L  LR+GV L
Sbjct: 62  VYAAGRLDRDSEGLLVLTNDGKLQAQLTQPGKRTGKVYYVQVEGAPQESDLASLRNGVTL 121

Query: 123 NDGMTLPAEARQLEEPE-LWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPT 181
            DG TLPA    + EP+ LWPRNPP+R RKS+PT+WL++ + EGRNRQVRRMTA +G PT
Sbjct: 122 KDGPTLPAGVELVAEPQWLWPRNPPIRERKSIPTAWLKVTLYEGRNRQVRRMTAHIGFPT 181

Query: 182 LRLVRVRIGPWTLGGLQPGEWR 203
           LRL+R  +G  +LG LQPGEW+
Sbjct: 182 LRLIRYSMGNLSLGELQPGEWK 203