Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 220 a.a., 23S rRNA pseudouridine(2457) synthase RluE from Erwinia tracheiphila SCR3

 Score =  221 bits (564), Expect = 6e-63
 Identities = 110/206 (53%), Positives = 144/206 (69%), Gaps = 5/206 (2%)

Query: 4   ISRPHPPRAAAARTPSRRVAKAPPAEPRLLLLNKPFDVLTQFNDADGRATLKDFVDVPGV 63
           +   H  R++++ T +    K    + R++  NKPFDVL QF D  GR TLKDF+ VPG+
Sbjct: 16  VKNHHNKRSSSSFTAN----KIKKGQRRVIAFNKPFDVLPQFTDERGRTTLKDFIPVPGI 71

Query: 64  YPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELN 123
           Y AGRLDRDSEGL+LLTNDG LQAR+  P  K+ K Y+VQV+GE + + LQ LR+GV L 
Sbjct: 72  YAAGRLDRDSEGLMLLTNDGVLQARLTQPGKKIGKIYYVQVDGEPTEKDLQPLREGVVLK 131

Query: 124 DGMTLPAEARQLEEPE-LWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTL 182
           DG TLPA   +  EP  LWPR P +R RK++ TSWL++++ EGRNRQVRRMTA +G PTL
Sbjct: 132 DGFTLPAGVERASEPHWLWPRTPAIRERKTIATSWLKIMLFEGRNRQVRRMTAHIGFPTL 191

Query: 183 RLVRVRIGPWTLGGLQPGEWREVPAQ 208
           RL+R  +G  TL  L PG WR++ ++
Sbjct: 192 RLIRFALGEVTLQDLPPGAWRDITSE 217