Pairwise Alignments

Query, 422 a.a., urea ABC transporter, urea binding protein from Pseudomonas stutzeri RCH2

Subject, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

 Score = 50.4 bits (119), Expect = 9e-11
 Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 25/253 (9%)

Query: 28  AAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVLGKQLEPVVVDPASNWPLF 87
           A+  + +G    ++G++A S       A + ID +NA+GG+ G+++E + +D   +    
Sbjct: 20  ASAQLLIGQTAGMTGSVAASVNETIGGAQLVIDAVNAQGGLYGEKIEVLRMDDGFDVKRA 79

Query: 88  AEKGRQLLTQDKVAVTFGCWTSVSRKSVLPVYEELDGLLFYP---VQYEGEELSPNVFYT 144
           ++  R L+   KV   F    +   ++++P  ++ D  L  P        + L  +VF  
Sbjct: 80  SDNARTLIEDKKVLALFMSRGTPHSQAIIPWLDKYDVALVGPSTGAMVLHKPLQKHVFNV 139

Query: 145 GAAPNQQAIPAVEYLMSEDGGSAERFFLLGTDYVYPRTTNKILRAFLISKGVPESSI--- 201
            A   ++A  AV++L++   G      +  TD          +  F   K  P ++I   
Sbjct: 140 RATYQREAEKAVQHLLTI--GLTRIAVVYVTDSFGQDALEGAMTGFTKGKAKPTATIPAD 197

Query: 202 ------EEVYTPFGHSDYQ---------TIVANIKKFSAGGKTAVVSTINGDSNVPFYKE 246
                 + +      ++ Q          +V  IK   A G  A V T++ +++  F K+
Sbjct: 198 RDKPDYKVIVPAIKEANAQAVVWIGSGVAVVDGIKALRAAGSAAQVVTLSNNASSGFIKQ 257

Query: 247 L--ANQGLDATDV 257
           L  A++G+  T V
Sbjct: 258 LGDASKGVIVTQV 270