Pairwise Alignments

Query, 523 a.a., urea ABC transporter, permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 3e-34
 Identities = 93/298 (31%), Positives = 150/298 (50%), Gaps = 13/298 (4%)

Query: 225 GELLGQAFSGLSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLA 284
           G  L Q  +GL+LGS+  L A+G  + +G++G+IN AHGE+ M+ A   Y+  + +A LA
Sbjct: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISA---YLAAISLALLA 59

Query: 285 PEALAFYPLVALPVAFF---VTAAIGMALERTVIRHLYGRP-LETLLATWGISLILIQLV 340
              +  +PL+ L    F   VT   G  +ER   + L     L  L++  GISLIL    
Sbjct: 60  YFGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYA 119

Query: 341 RVLFGAQNVEVANPAWLSGGLQV---LPNLVLPYNRMVIIGFALFVVLLTWLLLNKTRLG 397
           ++  GA+   +  P  L+G  +V      + L Y ++ I+  A   + L   ++  T+LG
Sbjct: 120 QIAQGAKQQGI--PTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLG 177

Query: 398 LNVRAVTQNRNMAACCGVPTGRIDMLAFGLGSGIAGLGGVALS-QIGNVGPDLGQSYIID 456
              RA  Q+R MA+  G+ T R+    F +G+ +A L GV ++   G      G    I 
Sbjct: 178 RMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIK 237

Query: 457 SFLVVVLGGVGQLAGSIFAAFGLGIANKILEPQIGAVLGKILILALIILFIQKRPQGL 514
           +F   VLGG+G L G++     LGI+  +    I +    +   +L+++ +  RPQGL
Sbjct: 238 AFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGL 295