Pairwise Alignments

Query, 523 a.a., urea ABC transporter, permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 3e-41
 Identities = 103/292 (35%), Positives = 153/292 (52%), Gaps = 18/292 (6%)

Query: 228 LGQAFSGLSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLAPEA 287
           L Q  +GL LG I  L A+GL I FGLL  +N AHG   +LGAY  Y    +        
Sbjct: 6   LFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF---- 61

Query: 288 LAFYPLVALPVAFFVTAAIGMALERTVIRHLYGRPLE-TLLATWGISLILIQLVRVLFGA 346
                 +AL +A  V AA+  A+ER +I+ +Y  P    +L T GI+LI+ +   +++G 
Sbjct: 62  -----WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGP 116

Query: 347 QNVEVANPAWLSGGLQVLPNLVLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQN 406
               +A P  L G L +L + + PY R+ +IGFA  + +  WLLL +TR G  VRA +++
Sbjct: 117 VGKNIAVPPELRGVL-ILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSES 175

Query: 407 RNMAACCGVPTGRIDMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGV 466
               +  G    R+  L F LG G+AG+ GV  + +    P +G   +  +F+VVV+GG+
Sbjct: 176 TETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGM 235

Query: 467 GQLAGSIFAAFGLGIANKI---LEPQIGAVLGKILILALIILFIQKRPQGLF 515
           G   G++     +G+   +   L PQ GA L     +A +IL    RP GLF
Sbjct: 236 GSFGGALVGGLLVGVVQSMMTSLWPQ-GASLMIYGAMAAVILV---RPYGLF 283