Pairwise Alignments

Query, 523 a.a., urea ABC transporter, permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 269 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score =  197 bits (501), Expect = 4e-55
 Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 25/280 (8%)

Query: 255 LGVINMAHGEMLMLGAYTTYMVQVLMARLAPEALAFYPLVALPVAFFVTAAIGMALERTV 314
           +GVINMAHGEM+M+GAY    V VL       +L    L+A+P+AF VTA +G+ +ER V
Sbjct: 1   MGVINMAHGEMVMIGAY----VAVLSGIWLKTSL----LLAIPLAFVVTALLGLIIERVV 52

Query: 315 IRHLYGRPLETLLATWGISLILIQLVRVLFGA--------------QNVEVANPAWLSGG 360
           +R LYGR L+TLLATWGI+++L Q VR+  G               QNV V  P++L G 
Sbjct: 53  VRRLYGRLLDTLLATWGIAILLQQAVRLELGLTFLGIHIEGLGAGLQNVAV--PSYLQGT 110

Query: 361 LQVLPNLVLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRI 420
            +     +  Y R  II     + L TW +L +T  G+ VRA+ +N  MAA CG+   RI
Sbjct: 111 FRFAGADINAY-RTFIIAVTAALTLATWFILYRTTAGMQVRAIIRNPKMAAACGIDVKRI 169

Query: 421 DMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSIFAAFGLG 480
           + L F  GSG+AG+ GV +S    V PD+G + ++D F+VVV GGVG L G+  ++  LG
Sbjct: 170 NALTFAFGSGLAGVAGVMMSGFKTVFPDMGTTMVVDGFMVVVTGGVGSLFGTALSSGLLG 229

Query: 481 IANKILEPQIGAVLGKILILALIILFIQKRPQGLFALKGR 520
             N ++      +L + ++  ++IL I  +P GLF+ KGR
Sbjct: 230 EINALVAIGTNDILARAVVFGVVILVILVKPSGLFSFKGR 269