Pairwise Alignments

Query, 358 a.a., urea ABC transporter, permease protein UrtC from Pseudomonas stutzeri RCH2

Subject, 418 a.a., ABC-type branched-chain amino acid transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  102 bits (255), Expect = 1e-26
 Identities = 104/378 (27%), Positives = 161/378 (42%), Gaps = 68/378 (17%)

Query: 7   LTAAQKAGPKLTAVALGIALV---------VLLAMPLLHLLPAEHALHVSAYTLTLVGKI 57
           L A   A P L  V  G             ++LA+ L+ L+   +    +    TL   I
Sbjct: 64  LAAGWAASPSLPTVPAGAGNFLTLPSTQRWIILALVLVALVWPFYGSRGAVDIATL---I 120

Query: 58  LCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQSAGDGLPAFMSFLAWNEL 117
           L Y ++ L L++V G AGLL LG+  F+A+G Y     L+    G G         W  L
Sbjct: 121 LIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYA--LLSHYYGVGF--------WTAL 170

Query: 118 PWYWYGTSSFLWAMCLVVLVPGVLAFVFGFFAFRS--RIKGVYFSIMTQALTFAGML-LF 174
           P                  + G +A +FGF       R++G Y +I+T  L F  ++ + 
Sbjct: 171 P------------------IAGAMAALFGFLLGFPVLRLRGDYLAIVT--LGFGEIIRIL 210

Query: 175 FRNETGF-GGNNGFT--DFKTILGFSISAPATRAT-------------------LFFATV 212
            RN T   GG NG +  D  T+ G S    A                       L+   +
Sbjct: 211 LRNMTSVTGGPNGISGIDKPTLFGLSFDRRAAEGMQTFHEYFGVAYNSVNKVIFLYLIAL 270

Query: 213 LLLVGSLYLGFRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWTLSAVLCGLAGAL 272
           LL++ +L++  RL R   GR   ALR+ E      G +P   KL  +TL A   G AG+ 
Sbjct: 271 LLVLLTLFVINRLLRMPIGRAWEALREDEIACRALGMNPTVIKLSAFTLGATFAGFAGSF 330

Query: 273 YVPQVGIINPSEMAPTQSIEAAVWVALGGRGTLIGPLLGAGIVNGMKSWFTVAFPEYWLF 332
           +  + G+++P      +S      V LGG G+ +G +L A IV  +       F EY + 
Sbjct: 331 FAARQGLVSPESFTFIESAIILAIVVLGGMGSQLGVIL-AAIVMILLPELMREFSEYRML 389

Query: 333 ALGALFIIVTLYLPKGVI 350
             GAL +++ ++ P+G++
Sbjct: 390 MFGALMVLMMIWRPQGLL 407