Pairwise Alignments

Query, 358 a.a., urea ABC transporter, permease protein UrtC from Pseudomonas stutzeri RCH2

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 1e-34
 Identities = 111/365 (30%), Positives = 166/365 (45%), Gaps = 53/365 (14%)

Query: 1   MNQPLTLTAAQKAGPKLTAVALGIALVVLLAMPLLHLLPAEHALHVSAYTLTLVGKILCY 60
           M++   L  A+   P L    L + +  L+A+PLL  LP+           TL  +IL +
Sbjct: 1   MSEKNPLPVAKGRAPAL----LSLVVASLVALPLL--LPSA----------TLATEILIF 44

Query: 61  AIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQSAGDGLPAFMSFLAWNELPWY 120
           A+ ALA +L+ GY GLLS G G+FF +G Y             G    M  L W      
Sbjct: 45  AMAALACNLLLGYTGLLSFGQGIFFGVGAY-------------GAALLMIHLQWG----- 86

Query: 121 WYGTSSFLWAMCLVVLVPGV-LAFVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNET 179
                  ++A  L   V G  LA + G  A R    G+YF ++T A +     L +    
Sbjct: 87  -------MFAALLGAAVFGAFLALLVGALAIRRT--GIYFVMLTLAFSQMAYFLAYTLSG 137

Query: 180 GFGGNNGFTDFKT----ILGFSIS--APATRATLFFATVLLLVGSLYLGFRLARSKFGRV 233
             GG+NG  D       I G  +   A      +F A + LL+ +  L  R+ RS FG  
Sbjct: 138 WTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAAL--RVIRSPFGST 195

Query: 234 LTALRDAENRLMFCGYDPRGYKLFIWTLSAVLCGLAGALYVPQVGIINPSEMAPTQSIEA 293
           L A+R+ E R    GYD R +K+ ++ LS  + G+AGALY   +     S +    S   
Sbjct: 196 LLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENI 255

Query: 294 AVWVALGGRGTLIGPLLGAGIVNGMKSWFTVAFPEYWLFALGALFIIVTLYLPKGVIGLI 353
            +   +GG G+L G LLGAG +  +    +  +P  WL  LG + I+V +++  G+ G +
Sbjct: 256 LIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR-WLMLLGVILILVVVFMRGGLWGGL 314

Query: 354 KRRGE 358
              G+
Sbjct: 315 TELGK 319