Pairwise Alignments

Query, 358 a.a., urea ABC transporter, permease protein UrtC from Pseudomonas stutzeri RCH2

Subject, 335 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  113 bits (283), Expect = 6e-30
 Identities = 97/337 (28%), Positives = 150/337 (44%), Gaps = 45/337 (13%)

Query: 17  LTAVALGIALVVLLAMPLLHLLPAEHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGL 76
           +  V +   L VL+A P+              Y + L+ K+LC+A+ A A +L+ GY GL
Sbjct: 25  IKTVLILAGLAVLIAAPMF------------VYPIFLM-KLLCFALFACAFNLLIGYTGL 71

Query: 77  LSLGHGLFFALGGYAMGMYLMRQSAGDGLPAFMSFLAWNELPWYWYGTSSFLWAMCLVVL 136
           LS GH  FF    Y                    F A++   W        +  M    L
Sbjct: 72  LSFGHAAFFGGAAY--------------------FTAYSVKEWGVTPEIGLIIGMAGAAL 111

Query: 137 VPGVLAFVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFG-GNNGFTDFKTILG 195
               L  V GFFA R +  G+YF+++T AL+   M  FF  +  F  G +G         
Sbjct: 112 ----LGLVIGFFAIRRQ--GIYFAMITLALS--QMFYFFCLQAPFTHGEDGLQGVPRGHL 163

Query: 196 FSISAPATRATLFFATVLLLVGSLYLGFRLARSKFGRVLTALRDAENRLMFCGYDPRGYK 255
           F +        +++  +   V +L + +R   S FG +L ++R+ E R +  GY  + YK
Sbjct: 164 FGLLDLNAPLNIYYTVLAAFVLALLVIWRFVNSPFGMILKSIRENEQRAISLGYSVQRYK 223

Query: 256 LFIWTLSAVLCGLAGALYVPQVGIINPSEMAPTQSIEAAVWVALGGRGTLIGPLLGAGIV 315
           L  + +SA L GLAG L          +++    S E  +   LGG GT+IGP+ GAG+V
Sbjct: 224 LGAFVMSAALAGLAGGLKALVFQFATLTDVTWQMSGEVILMTLLGGIGTMIGPIFGAGLV 283

Query: 316 NGMKSWF-TVAFPEYWLFALGALFIIVTLYLPKGVIG 351
             ++++  T  FP       G +F+   L   +G+IG
Sbjct: 284 VTLQNYLATSDFPV--TIITGLVFMACVLVFRRGLIG 318