Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas stutzeri RCH2

Subject, 310 a.a., D-alanyl-D-alanine endopeptidase from Escherichia coli BL21

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 20/258 (7%)

Query: 24  AAQILPSAPQLAAKSYLLMDAASGEVLVEHNGDERLPPASLTKLMTAYIATLEIQKGQIS 83
           AA    S P++A+ S +++D  + +V+  ++ D   P AS++KLMTA +      +  + 
Sbjct: 28  AAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVL--DARLPLD 85

Query: 84  DNDMVTVSEKAWRTGGSRMFIQVNTQVSVDDLLHGIIIQSGNDASVAMAEHIAGSEEAFA 143
           +   V +S+      G    +++N+++S  D+L   ++ S N A+ ++A H  G  +AF 
Sbjct: 86  EKLKVDISQTP-EMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFI 144

Query: 144 DLMNSAAQRLGMTNTHFMNATGLPDPDHYSSAGDMAKLARAIIYEDPAHYAIYAQ----- 198
             MN+ A+ LGM NT F+  TGL    + S+A D+ KL  A        Y +  Q     
Sbjct: 145 KAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIA-----SKQYPLIGQLSTTR 198

Query: 199 --KEFFWN---NIKQPNRNLLLWRDK-TVDGLKTGHTEEAGYCLVASAVRDNMRLISVVF 252
                F N    +   N N L++RD   +   KTG T  AG+CLV   V +N  +  VV 
Sbjct: 199 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 258

Query: 253 GTDSEQARAAETQKLLTY 270
               +    A+  +L T+
Sbjct: 259 DAFGKYTHFADASRLRTW 276