Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas stutzeri RCH2

Subject, 388 a.a., D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b from Escherichia coli BL21

 Score =  268 bits (686), Expect = 1e-76
 Identities = 148/355 (41%), Positives = 215/355 (60%), Gaps = 10/355 (2%)

Query: 29  PSAPQLAAKSYLLMDAASGEVLVEHNGDERLPPASLTKLMTAYIATLEIQKGQISDNDMV 88
           P  P++ A S++LMD  +G++L   N  ++  PASLTKLMT Y+    I   +I+ +D+V
Sbjct: 29  PQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88

Query: 89  TVSEKAWR------TGGSRMFIQVNTQVSVDDLLHGIIIQSGNDASVAMAEHIAGSEEAF 142
           TV   AW        G S MF++   +VSV DL  G+I+ SGNDA VA+A++IAG +  F
Sbjct: 89  TVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQF 148

Query: 143 ADLMNSAAQRLGMTNTHFMNATGLPDPDHYSSAGDMAKLARAIIYEDPAHYAIYAQKEFF 202
            ++MN+ A++L + +THF    GL  P  +SSA D+A L+RAII+ +P  Y +Y++K   
Sbjct: 149 VEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLT 208

Query: 203 WNNIKQPNRNLLLWRDKT--VDGLKTGHTEEAGYCLVASAVRDNMRLISVVFGTDSEQAR 260
           WN I Q NRN LLW DKT  VDGLKTGHT  AG+ L+ASAV    RLI+VV G DS + R
Sbjct: 209 WNGITQQNRNGLLW-DKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGR 267

Query: 261 AAETQKLLTYGFRFFETRTFYQKGTELAQAQVWKGQQDKLKAGLAQDLTMTLPRGQVEKL 320
             E +KLL +G + F T     +  ++   ++W G ++ +  G  Q+  M LP+ ++  +
Sbjct: 268 EEEAKKLLRWGQQNFTTVQILHRRKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHI 327

Query: 321 QAVMSFNG-TLIAPIQQGDVIGKVEVKLDDKVVRSTDLVALETIEEGGLFRRFWD 374
           +A  + NG  L API     +G++E+   DK V    LV LE++ EG +F R  D
Sbjct: 328 KAKYTLNGKELTAPISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSD 382