Pairwise Alignments

Query, 804 a.a., DNA gyrase, B subunit from Pseudomonas stutzeri RCH2

Subject, 803 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Dickeya dianthicola ME23

 Score = 1114 bits (2882), Expect = 0.0
 Identities = 558/804 (69%), Positives = 660/804 (82%), Gaps = 7/804 (0%)

Query: 4   NHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDISI 63
           +++YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C DI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHEE-GVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 122
           TIH D S++V+D+GRGIP  IHEE GVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 123 VVNALSEELMLTIRREGKVWEQLYRHGVPQAPLAPVGETDSSGTQIHFKPSAETFQN-IH 181
           VVNALSE+L L IRREGKV  Q YRHGVPQAPL   G+ D++GT + F PS ETF N + 
Sbjct: 122 VVNALSEKLELVIRREGKVHRQEYRHGVPQAPLGATGDADATGTTVRFWPSLETFTNMVE 181

Query: 182 FSWDILAKRLRELSFLNSGVGIVLRDERTA-KEELFKYEGGLSAFVAYLNTNKTPVN-EV 239
           F +DILAKRLRELSFLNSGV I LRDER   K + F YEGG+ AFV YLN NKTP++ +V
Sbjct: 182 FEYDILAKRLRELSFLNSGVSIRLRDEREENKADHFHYEGGIKAFVEYLNRNKTPIHPQV 241

Query: 240 FHFNVQRDDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNSYIEQ 299
           F+F+ ++D  +GVE+A+QWND F ENI CFTNNIPQRDGGTHLAGFR+A+TR LN+Y+++
Sbjct: 242 FYFSAEKDS-IGVEIAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYMDK 300

Query: 300 EGLAKKHKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKHFAD 359
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+A+E  M     D
Sbjct: 301 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSALESLMNDRLVD 360

Query: 360 FLLEHPSEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 419
           +L+E+P++AK VVGK+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 361 YLMENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSE 420

Query: 420 LYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG 479
           LY+VEGDSAGGSAKQGRNRK QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCGIG
Sbjct: 421 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 480 RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKR 539
           RDEYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQ+PE++ERG+V+IAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVFIAQPPLYKVKK 540

Query: 540 GKQEQYIKDDEAMEEYLTQSALEDASLHVNEGAPGLSGGALEKLVNDYRTVMKTLQRLSR 599
           GKQEQYIKDDEAM++Y    AL+ A+LH N  AP L+G  LEKLV +Y    K + R+ R
Sbjct: 541 GKQEQYIKDDEAMDQYQIMLALDSATLHTNAHAPALAGEPLEKLVAEYYGAQKLIDRMER 600

Query: 600 LYPQELTEHFIYLPRVPVEQLADHSAMQAWLEQYSALLKVGERSGLIYNVSLREDKERHL 659
            YP+ L    +Y P +   +L D +  Q W++     L   E+ G  Y+  LR+  ERH 
Sbjct: 601 RYPRALLNALVYQPALTEARLNDQAQAQQWIDSLIHYLNEKEQHGSTYSFLLRQSNERH- 659

Query: 660 WLPEVEISSHGLASYITFNRDFFGSNDYRTVTALGEKLNSLLEEGAYVQRGERKKQVATF 719
             P + + +HG+ S    +  F   N+YR +  LGEKL  L+E+ AYV+RGERK+ VA+F
Sbjct: 660 -EPVLRVRTHGVDSDYALDLAFVQGNEYRKINLLGEKLRGLIEDSAYVERGERKQPVASF 718

Query: 720 KQALEWLMTEGTRRHSVQRYKGLGEMNPDQLWETTMDPNVRRMLKVTIEDAIGADQIFNT 779
           +QAL+WL+ E  R  ++QRYKGLGEMNP+QLWETTMDP  RRML+VT++DAI AD++F T
Sbjct: 719 EQALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADELFTT 778

Query: 780 LMGDAVEPRRDFIETNALAVSNLD 803
           LMGDAVEPRR FIE NAL  +N+D
Sbjct: 779 LMGDAVEPRRAFIEENALKAANID 802