Pairwise Alignments

Query, 326 a.a., Flagellar motor protein from Pseudomonas stutzeri RCH2

Subject, 285 a.a., flagellar motor protein from Pseudomonas putida KT2440

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 24  WKIAFADFATAMMAFFLVMWLMSSATPEQKKLIS----GYFQDPIGFTESASPHVIDLGG 79
           W +++ADF T + AFF+VM+ +SS    + K+IS    G F DP     S  P  I   G
Sbjct: 16  WLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDP---ERSMKPIPI---G 69

Query: 80  TPTPSPDRTLNPELEPAQSEAQIDSSQVETFAEQLERERLELLLQELQNKVDENPELQKF 139
              P   R   P ++        DS Q E        + L+ +  ++++          F
Sbjct: 70  DEQPLSVRPAEPLVK--------DSEQTEAGLAATNVDPLKTISDDVRD---------AF 112

Query: 140 KDQI-LFEITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVDTIAAV----PNKI 194
            D I   ++T  G  + I + E       GS    P   D   A+++ +A++     N +
Sbjct: 113 GDLINSDQMTVRGNELWI-EIELNSSLLFGSGDAMP--SDKAFAIIEKVASILKPFANPV 169

Query: 195 SISGHTDAKPYSGRGDFGNWELSSGRANAARRTLVTGGYPEEQIARVVGYASSALFDRND 254
            + G TD  P        NWELSS RA +  R L   G    ++A  VGY        ND
Sbjct: 170 HVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMAS-VGYGEYQPVASND 228

Query: 255 PF--NPVNRRIDILVLTK--KAQRSIEGEQS-----DAAEGAVPAQGAAPAVQEPLQAP 304
                  NRR+ +LV+++  + +RS+ G  S     DAA      Q +APA+Q  +  P
Sbjct: 229 TAEGRARNRRV-VLVISRNLEVRRSLTGSGSANATPDAALRRAGTQ-SAPAIQATVARP 285