Pairwise Alignments

Query, 688 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

 Score =  132 bits (332), Expect = 6e-35
 Identities = 165/659 (25%), Positives = 277/659 (42%), Gaps = 37/659 (5%)

Query: 45  LAEALKQTWDLLINAPQSENLDPSEAIAAIR--RQAKDIPIIQLTAGNDAEA-ITDALML 101
           L+  L+   DL++   Q   +D  E    +R  ++ +  PII LTA   +EA +      
Sbjct: 51  LSALLEYEVDLVLMDVQMPEMDGFEVARLMRGNQRTRLTPIIFLTANEKSEAAVLKGYAS 110

Query: 102 GAQDALPQGEDEWLLLVANRELANLEERRARRSAEVALREAEKRCQL---LLDSSVDAIA 158
           GA D + +  D  +L    + L  L+++R RR  +   RE E        +L+++ + I 
Sbjct: 111 GAVDYMFKPFDPQILKPKVQAL--LDQQRNRRMLQQLSRELETARAFNASILENAAEGIL 168

Query: 159 YVH-DGMHIYANRAYLELFGYADVEDLEGMPMIDLISGSDQSTFKA--FLKNYQTLE--- 212
            V   G+  +AN A   L   A V+ L+G  ++D++  +  S ++   F K YQ  +   
Sbjct: 169 VVDAHGIIRFANPAISRLLA-APVQHLQGTQLLDVVQLTSTSLWRESDFYKAYQGRQIYR 227

Query: 213 -GSAELACGGVRADGETLKTRMHFSPAAYDGEPCIQVVIRAENDSAELQKLREISSQDPV 271
              A+L   G    GE +   +  +P   D +  +  V+         Q+L   +  DP+
Sbjct: 228 VHDAQLRTQG----GELVPVALSCAPLPADQQAMVVTVLDMSAVRNLHQQLEYQAITDPL 283

Query: 272 TGLLNRNSFLEVMDAAVERAVNAGQTASLAYIRIDRFAALQAEIGLTDSDQLLNQLAILL 331
           TGLLNR  F +  + A+ R   + +  +L Y+ +D F  +   +G    D++L  +A  L
Sbjct: 284 TGLLNRRGFYQAAEGALLRNERSDKAQALMYMDLDGFKRINDSLGHDAGDRVLRWVAEQL 343

Query: 332 RGHFPAETQLARFADDVFTVLQPGV-IPQLAEPELRKLLSKVE-GHLLDVGGRTVQTTLS 389
           +    +E  LAR   D FT L   +  P+ A     +LL +V   H  +V G  V   +S
Sbjct: 344 KDCLGSEALLARMGGDEFTALFDSLPYPEQAGRFAERLLERVSISH--EVDGLDVCLGVS 401

Query: 390 IGVAGLDEKTAKAQDAIERAHRC--ADELSDGNALKIYDPADEL-AAAANRGDIAAMLRQ 446
           IG+A   +  A  +  +  A     A + +     + YD   EL   A +R  +   +R 
Sbjct: 402 IGIATYPDCGANVEGLLRSADAAMYAAKQAGRQQYRFYD--QELNGRARSRLMLEDSVRM 459

Query: 447 ALENNSFRLLFQPIISLRGDSFEHYEVLLRLLDPQGAEVPPNEFLSTAADVGLSAKIDRW 506
           A+E   F L++QP ++        +E LLR   P   +VPP  F+    +  L  ++  W
Sbjct: 460 AIEQQDFTLVYQPQVAFHDGRLRGFEALLRWQHPSVGDVPPGLFIPLLEEARLINRLASW 519

Query: 507 VILNSIKLLAEHRAKGHR----TRLFLHLCAASLQDPSLLPWLGVVLKASRLPGDSLVFE 562
           +        A+ +A   R      L + L  A    P L+  L  V++  +L    L  E
Sbjct: 520 IYRQG---AAQRQAWYDRFPPDLVLGISLSRAQFVMPGLVEELQRVIQLYQLVPTQLEVE 576

Query: 563 FGEADAVAYLKPAKALAQGLRGLGCHIGLAQFGCVLNPFNTLKHLDAGFIKVDGSYTQDL 622
             E   +  +  A      LR LG  + L  FG        L+ L    +K+D      L
Sbjct: 577 VAETSLMYNIDAAVKQIHRLRELGVRVALDDFGAGDCSLRMLRDLPIDTLKLDRHLVARL 636

Query: 623 TRQENQEAL-KTLLADLHEQQKQSIVPFVESATVLATLWQAGVSYIQGHYLQGPSQSMD 680
                  AL ++++    + +   I   VE+    A L   G  Y+QG  +  P  + D
Sbjct: 637 PDSTVDAALVRSVIGLCADYRITVIAEGVETPAQAAWLKANGCEYVQGFLVAYPMTATD 695