Pairwise Alignments

Query, 750 a.a., DNA topoisomerase IV, A subunit, proteobacterial from Pseudomonas stutzeri RCH2

Subject, 923 a.a., DNA gyrase, subunit A from Pseudomonas putida KT2440

 Score =  417 bits (1073), Expect = e-120
 Identities = 288/797 (36%), Positives = 431/797 (54%), Gaps = 91/797 (11%)

Query: 16  SLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLNADAKHKKSARTVG 75
           ++ D   Q+YL+Y+M VI+ RALP   DGLKPV RR++YAMSELG + +  +KKSAR VG
Sbjct: 12  NIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVVG 71

Query: 76  DVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRY 135
           DV+GK+HPHGD+A Y+ +V MAQPFS RY LVDGQGN+G+ D   + AAMRYTE R+++ 
Sbjct: 72  DVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNA-AAMRYTEVRMTKL 130

Query: 136 SEVLLSELGQGTVEWVPNFDGTLDEPATLPARLPNLLLNGTTGIAVGMATDVPPHNLREV 195
           +  LL++L + TV+WVPN+DGT   PA +P R+PNLL+NG++GIAVGMAT++PPHNL EV
Sbjct: 131 AHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEV 190

Query: 196 AAACVRLLDEPSASVEQLCEHVRGPDFPTEAEIITPRADLLKIYETGRGSVRMRAVYRVE 255
              C+ L+D P  ++++L +H+ GPDFPT A II  R  +++ Y TGRG + MRA   +E
Sbjct: 191 IDGCLALIDNPEVTIDELMQHIPGPDFPT-AGIINGRQGIIEAYRTGRGRIYMRARSEIE 249

Query: 256 DGD-------IVVTALPHQVSGSKVLEQIAGQMQAKKLPMVADLRDESDHENPCRIVIIP 308
           D D       IV+T LP+Q++ ++++E+IA  ++ KK+  + +LRDESD +   RIVI  
Sbjct: 250 DIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKDG-MRIVIEL 308

Query: 309 RSNRVDVEGLMQHLFATTDLESSYRVNANVIGLDGRPQVKNLRTLLSEWLTYRIGTVRRR 368
           R   V  E ++ +L+  T L+S + +N  V  +DGRP++ NL+ LL  ++ +R   V RR
Sbjct: 309 RRGEVP-EVVLNNLYQQTQLQSVFGINV-VALVDGRPRLLNLKDLLEAFVRHRREVVTRR 366

Query: 369 LQFRLDKVEKRLHLLEGLLVAFLNLDEVIHII---------------------------- 400
             F L K  +R H+LEG  VA  N+D VI +I                            
Sbjct: 367 TVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSAVQVMVE 426

Query: 401 -------RTEDQPKPVLM--ARFELSELQADYILDTRLRQLARLEEMKIRGEQDELAKER 451
                  R ED P+   +   ++ LS  QA  ILD RL +L  LE  K+  E  E+ ++ 
Sbjct: 427 RAGADSCRPEDLPEQYGLHDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQEILEQI 486

Query: 452 EKLLALLGSEAKLKKLVRKELLADAETYGDARRSPIVERAEARALSENELLPSEPVTVVI 511
            +L+ +L S  +L +++R+EL A    YGD RR+ I+    +  L+  +++P E   V I
Sbjct: 487 GELIRILSSAERLMEVIREELEAIRAEYGDVRRTEILN--ASHDLNYGDMIPEEERVVTI 544

Query: 512 SEKGWARCAK----------GHDIDATGLSYKAGDGFKTAAAGRSNQYAVFIDSTGRSYS 561
           S  G+A+             G    ATG+  K  D  +      S+   +   S G+ Y 
Sbjct: 545 SHGGYAKTQPLSAYQAQRRGGKGKSATGV--KDEDYIEHLLVANSHATLLLFSSKGKVYW 602

Query: 562 LAAHSLPSA--RGQGEPLTGRLAPPPGASFECVLLPEDDALYVIAS-----DAGYGFVVK 614
              + +P A    +G PL   L    G     +L  + +AL   A      D     V++
Sbjct: 603 KKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDEAEDTVLE 662

Query: 615 GEDLQAKNKAGKALLSLPKGAKVVAPRPLASRDDDWLAAVTTEGRLLVFPVRDLPQLGKG 674
           GE ++A+       +    G     P  +A     ++   T  G +   P   L Q  + 
Sbjct: 663 GELVEAEE------VDEEDGD---TPEWVAEPTGAYIFMATASGTVKKTP---LVQFARP 710

Query: 675 KGNKIIGIPGERVASREEYLIDLALLPAGATLVL---QAGKRTLSLKAEDLEHYKGERGR 731
           + N +I +       +E   +  A +  GA  V+    AGK     ++   E  +  RG 
Sbjct: 711 RSNGLIAL-----KLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGV 765

Query: 732 RGNKLPRGFQRVEGLLV 748
           RG KL +G QR+  +L+
Sbjct: 766 RGMKLGKG-QRIISMLI 781