Pairwise Alignments

Query, 611 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

 Score =  597 bits (1539), Expect = e-175
 Identities = 312/609 (51%), Positives = 423/609 (69%), Gaps = 3/609 (0%)

Query: 2   LFRRFENLIDVFKPSPDVAPPAGMLRFYAHYLKQVWPLMTAVLVVGFFAALIEVALFSFL 61
           LFR FE L+  +  +    PP G   F       V   + A+ V+    ++ E ALF+ L
Sbjct: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60

Query: 62  GQLIDMAQATDDARTFFAEHRNELLWMAAVALIIRPLVFGLHNLLTHQAINPGLTNLIRW 121
           G+++D       +R  + +    L+W+AA  L+I   V  L  ++ HQ +   L   +RW
Sbjct: 61  GRIVDWLGGQVPSR-LWEDRGTTLMWLAAF-LVISIGVVALQTIVKHQTLAVNLPMRLRW 118

Query: 122 QNHRYVLKQSLNFFQNDFAGRIAQRVMQTGPSLRDSAMQVIDALWHVVVYAGSALYLFAA 181
             HR +L QS+ F+Q++FAGRI  +VMQT  ++R++   + D L  + VY  + + L   
Sbjct: 119 NFHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGV 178

Query: 182 ADLRLIVPLLLWIVGYSAALWYFVPRIRARSAAASAARSKVMGRVVDGYSNVATLKLFAH 241
            D +L+ P L+W+V Y  +L YFVPR+     A + AR+ + GRV D Y+N+AT+KLF+H
Sbjct: 179 LDAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSH 238

Query: 242 SREEESYAREAMQELLGKFRLQSRVITSLDFLITCMNGLLIVGTGALALWLWSEALITTG 301
           ++ E  +AR+AM+E +     Q R++++ + +   ++  L  G   +ALWLWS   +  G
Sbjct: 239 TQREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVG 298

Query: 302 AIALALGLVIRINNMAEWIMWVVNGIFENVGTVQDGMKSIVRPRDVLDPEDAEPLQVEQG 361
           A+A A  + +R+  M+ WIMW +  +FEN+GTVQDGMK++ RPR VLD  DA  LQV QG
Sbjct: 299 AVAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQG 358

Query: 362 GVRFEDVHFHYGKQGG-VISGLSIDIRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRI 420
            VRFE   F YG  G  VI  L++ ++PGEKIGLVG SGAGKSTLVNLLLR +DLESGRI
Sbjct: 359 EVRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRI 418

Query: 421 LIDGQNVAEVSQESLRANVGVVTQDTSLLHRSIRDNLRYGKPDATEEELWAAARKARADE 480
           LIDGQ++A V+Q+SLR+++G+VTQDTSL+HRS+ DN+ YG+PDAT E++ AAAR+A A +
Sbjct: 419 LIDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHD 478

Query: 481 FIKALDDSQGGLGFEAMVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEVE 540
           FI+ L D+ G  G+EA VGERGVKLSGGQRQR+AIARV+LKDAPIL+LDEATSALDSEVE
Sbjct: 479 FIQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVE 538

Query: 541 AAIQESLDTLMEGKTVIAIAHRLSTIARMDRLVVIDGGQVIETGTHAELIARGGLYARLW 600
           AAIQ+SL TLMEGKTVIAIAHRLSTIA MDRL+V+D G+V+E G H  L+A+GGLYARLW
Sbjct: 539 AAIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLW 598

Query: 601 QHQTGGFVG 609
            HQ+GGF+G
Sbjct: 599 AHQSGGFLG 607