Pairwise Alignments

Query, 611 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  276 bits (706), Expect = 2e-78
 Identities = 198/589 (33%), Positives = 319/589 (54%), Gaps = 52/589 (8%)

Query: 39  LMTAVLVVGFFAALIEVALFSFLGQLIDM-------AQATDDARTFFAEHRNELLWMAAV 91
           L+  ++V+   + L EV +  F G+++D        A A D A   F      ++ +   
Sbjct: 30  LVGFIIVLVVASTLAEVMVPVFSGRIVDAIAGDNGGANAGDGALRAFVI----VVALGFT 85

Query: 92  ALIIRPLVFGLHNLLTHQAINPGLTNLIRWQNHRYVLKQSLNFFQNDFAGRIAQRV---M 148
           ++++R  +F     LT + +     N         V + S ++  N FAG   +++   M
Sbjct: 86  SVVLRWFIFNGIIRLTLKTMADVTNN-----GFHKVQRFSTDWHANSFAGSTVRKITRGM 140

Query: 149 QTGPSLRDSAMQVIDALWHVVVYAGSALYLFAAADLR-LIVPL--LLWI-VGYSAALWYF 204
               SL D  + ++  L  +V+  G+ + L +   +  LIV L  L++I V    ++ Y 
Sbjct: 141 WALDSLND--LLLVALLPSIVMLVGATVVLGSYWPVMGLIVGLGSLIYIGVTVGLSMGYV 198

Query: 205 VPRIRARSAAASAARSKVMGRVVDGYSNVATLKLFAHSREEESYAREAMQELLGKFRLQS 264
            P  R     A+A  +++ G + D  S  A +K F     EE+     +  +L K+  ++
Sbjct: 199 SPAARL----ANAWDTRLGGALADAISCNAVVKAFGAETREET----RLGHVLVKWDNRT 250

Query: 265 RVI--------TSLDFLITCMNGLLIVGTGALALWLWSEALITTGAIALALGLVIRINNM 316
           R          T   F++  M    I+GTG +   +W + L T G I   L +   +   
Sbjct: 251 RRTWKRGTLNGTIQSFMMVSMQAG-ILGTGLI---MWQKGLATAGDITFVLAMFFVLQGY 306

Query: 317 AEWIMWVVNGIFENVGTVQDGMKSIVRPRDVLDPEDAEPLQVEQGGVRFEDVHFHYGKQG 376
              +   +  +   V  +++ +     P  V D  DA+ + + +G + F+ V F YG   
Sbjct: 307 LRDVGQDIRNLQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVTFQYGAHA 366

Query: 377 GVI-SGLSIDIRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRILIDGQNVAEVSQESL 435
             +    S+ I+PGE++GLVG SG+GK+T V L+ RLYD+++G I IDGQN+A+V+Q SL
Sbjct: 367 TPLYEDFSVTIKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIADVTQASL 426

Query: 436 RANVGVVTQDTSLLHRSIRDNLRYGKPDATEEELWAAARKARADEFIKALDDSQGGLGFE 495
           R  + +V Q+  L HR++ +N+ YG+PDA+  E+  AA++A A +FI +L       G+E
Sbjct: 427 RGQIAIVQQEPILFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLPK-----GYE 481

Query: 496 AMVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEVEAAIQESLDTLMEGKT 555
            MVGERGVKLSGG+RQR+AIAR  L DAP+L+LDEATS+LDSE E  IQ++++ LM+G+T
Sbjct: 482 TMVGERGVKLSGGERQRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDGRT 541

Query: 556 VIAIAHRLSTIARMDRLVVIDGGQVIETGTHAELI-ARGGLYARLWQHQ 603
            + IAHRLST+  +DRL+V D G+++E G H  LI    G+Y RL++ Q
Sbjct: 542 TLVIAHRLSTVRALDRLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQ 590