Pairwise Alignments

Query, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  908 bits (2346), Expect = 0.0
 Identities = 462/585 (78%), Positives = 515/585 (88%), Gaps = 6/585 (1%)

Query: 8   SSMKVYLRLLRYVVPYWGLFTISLVGFLIFASTQPMLGYMLKFFVDGLNNPESSFFGQVP 67
           SS+K+Y RLL YV PY G+F +S+VGF+IFASTQPML  +LK+FVDGL+NPE+  F  VP
Sbjct: 12  SSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVP 71

Query: 68  YLQEHSWLAELKLLQAVPLLIVFIALMQGIGSFLGNFFLAKVSLGLVHDLRLALFNNMLT 127
           YL++      L+LLQAVPLLI+ IA  QG+GSFLGN+FLAKVSL LVHDLR+ALFN +L 
Sbjct: 72  YLRD------LQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLV 125

Query: 128 LPNRYFDSHNSGHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFATLLWMNWKLTLV 187
           LPNRYFD+HNSGHLISRIT+NVTMVTGAATDAIKVV+REG+TV+FLFA LLWMNW LTLV
Sbjct: 126 LPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLV 185

Query: 188 MLAILPVIGFMVSSASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRSFGGEPYERNRF 247
           M+AILPVI  MVS ASKKFRKQSKKIQ+AMGDVTHVASETIQGYRVVRSFGGE YE+ RF
Sbjct: 186 MVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRF 245

Query: 248 LTASSENTAKQLRMVKTNAVYTPSLQLVIYSAMAVLMFLVLLLRGDASAGDLVAYITLAG 307
             AS  NT KQLRM KT ++YTP LQLVIYSAMA LMFLVL LRGD++AGDLVAYIT AG
Sbjct: 246 GQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDLVAYITAAG 305

Query: 308 LLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEPEIDQGTLEREAVSGHLEVRNLDFVYP 367
           LLPKPIRQLSEVSSTIQKG+AGAESIFEQLDE PE+D GT+E+E V G LEVRNL F YP
Sbjct: 306 LLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYP 365

Query: 368 GTDKQVLRDISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEAGQILLDGADVESYTL 427
           GT+++VL DISF  EPGQM+ALVGRSGSGKSTLA LIPRFYHH+ GQILLDG ++E Y L
Sbjct: 366 GTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRL 425

Query: 428 RNLRRHIALVTQQVTLFNDTVANNIAYGDLAGAPLDDIRRAARDAYADEFIEQMPEGYQT 487
           RNLRRH++ VTQ VTLFNDTVANNIAYGDLAGAP  DI  AA DAYA EF++++P+G+ T
Sbjct: 426 RNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDT 485

Query: 488 LVGENGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDTESERHIQGALDHVMQGRTT 547
            VGENGVLLSGGQRQRLAIARALLKN+P+LILDEATSALDTESERHIQ ALDHVMQGRTT
Sbjct: 486 EVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTT 545

Query: 548 LVIAHRLSTIEKADQILVMEQGRIVERGTHAELLAVNGAYARLHA 592
           LVIAHRLSTIEKADQILVM+QGR+VERGTH ELLA NG YARLHA
Sbjct: 546 LVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLHA 590