Pairwise Alignments

Query, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

Subject, 587 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  324 bits (831), Expect = 6e-93
 Identities = 211/587 (35%), Positives = 335/587 (57%), Gaps = 29/587 (4%)

Query: 18  RYVVPYWGLFTISLVGFLIFASTQPMLGYMLKFFVDGLNNPESSFFGQVPYLQEHSWLAE 77
           ++V PY     ++L+  ++ A+    +G  ++  VD                Q     + 
Sbjct: 18  QFVRPYRRQVLLALLALVVTAAITLSMGQGIRLLVD----------------QGFMTRSA 61

Query: 78  LKLLQAVPLLIVFIALMQGIGSFLGNFFLAKVSLGLVHDLRLALFNNMLTLPNRYFDSHN 137
            +L Q + L ++ + L   +G+F   + ++ +    V D+R A+F++++ L   +F+ + 
Sbjct: 62  HQLNQTIGLFLLLV-LALAVGTFSRFYLVSWIGERCVADIRRAVFDHLIGLHPGFFEDNR 120

Query: 138 SGHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFATLLWMNWKLTLVMLAILPVIGF 197
           S  + SR+T + T++      ++ + +R  + VI     L   N KLT +++  LP++  
Sbjct: 121 SSEIQSRLTADTTLLQSVIGSSLSMFLRNALMVIGGVVLLFITNPKLTSIVVVTLPLVLA 180

Query: 198 MVSSASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRSFGGEPYERNRFL-TASSENTA 256
            +    ++ R  S++ Q  + DV    +ET+   + V+++  + ++R  F  T  +  T 
Sbjct: 181 PILLFGRRVRSLSRQSQDRVADVGSYVAETLGQIKTVQAYNHQAHDRELFADTVEAAFTV 240

Query: 257 KQLRMVKTNAVYTPSLQLVIYSAMAVLMFL--VLLLRGDASAGDLVAYITLAGLLPKPIR 314
            + R+ +   + T  + LV+  A+ V++++  + ++ G  SAG+L A++  + ++     
Sbjct: 241 ARKRITQRAWLITLVIVLVL-GAVGVMLWVGGMDVIAGRISAGELAAFVFYSLIVGSAFG 299

Query: 315 QLSEVSSTIQKGVAGAESIFEQLDEE-----PEIDQGTLEREAVSGHLEVRNLDFVYPGT 369
            LSEV   +Q+    AE I E L        P++ Q  L +   SGH+E++ + F YP  
Sbjct: 300 TLSEVIGELQRAAGAAERIAELLAARSAILPPDVAQ-VLPQPRASGHIELQQVVFAYPSR 358

Query: 370 DKQVLRD-ISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEAGQILLDGADVESYTLR 428
                 D +S TIEPGQ VALVG SG+GKSTL +L+ RFY  + G+ILLDG  V  +   
Sbjct: 359 PTVAAVDGLSLTIEPGQTVALVGPSGAGKSTLFDLLLRFYDPQQGRILLDGQPVTDFDPD 418

Query: 429 NLRRHIALVTQQVTLFNDTVANNIAYGDLAGAPLDDIRRAARDAYADEFIEQMPEGYQTL 488
            LRR  ALV Q  +LF  TV  NI YG    A L ++  AAR A+ADEFI Q+P+GYQT 
Sbjct: 419 QLRRQFALVAQNPSLFRGTVEANIRYGR-PEATLAEVEAAARGAHADEFIRQLPQGYQTP 477

Query: 489 VGENGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDTESERHIQGALDHVMQGRTTL 548
           +GE G+ LSGGQRQRLAIARALL ++P+L+LDEATSALD +SE  IQ AL  +M GRTTL
Sbjct: 478 LGEGGIGLSGGQRQRLAIARALLVDAPILLLDEATSALDAQSEYLIQQALPSLMAGRTTL 537

Query: 549 VIAHRLSTIEKADQILVMEQGRIVERGTHAELLAVNGAYARLHATQF 595
           VIAHRL+T++ A++I V++QGR+V  GTH +L+  +  YARL A QF
Sbjct: 538 VIAHRLATVQHAERIAVIDQGRLVAVGTHRQLIEDSPLYARLAALQF 584