Pairwise Alignments

Query, 382 a.a., Lipid A core - O-antigen ligase and related enzymes from Pseudomonas stutzeri RCH2

Subject, 391 a.a., O-antigen polymerase from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 2e-63
 Identities = 139/378 (36%), Positives = 209/378 (55%), Gaps = 16/378 (4%)

Query: 8   AWLALGFAWFLLGMMFLPSSKLYHQGLILLFWLPGMA-AWLPGIRARLHWDRW--LLAGL 64
           AWL LG  WFL  +   PS+K+Y QGL+L  WLP +  AW         W R   L   +
Sbjct: 10  AWLGLGLVWFLAAIALAPSNKVYQQGLVLFLWLPTLVLAWSARGVLVQAWRRQPALWGSV 69

Query: 65  LACVVWALLSVSWGGDS---KRFKEMFYVLLTAQAFVVLAGLYREHIWRLLVCLAMIGSL 121
           L  + W+ LS++W       +  K + Y+L+   AF +LA L +  I +LL+  + + ++
Sbjct: 70  LLLLAWSGLSLAWSPAEEPMRELKRLLYILVFLLAFPLLAQLGQARIRQLLLLGSALLAI 129

Query: 122 GALWSIIDFYLLQGRPLGNRLVGSGLLDHPILAAHLMGALSVLLLGLRSRLPEALPRWTW 181
            AL SII FY +Q  PL  RL G G + HPIL A+++G+  +L+L    R       W  
Sbjct: 130 AALVSIIKFYGVQRAPLLFRLAGIGEISHPILGAYVIGSALLLMLYEPPRRRGLQLLWLA 189

Query: 182 WVACLAYFAFIVLTRSKGPLLALIVACLIIPICAPSR-GRI--LLALLLLGGAIMAVCLS 238
            +ACL   AF +L++S+G +LAL++  ++ P+    R  R+  +LALL  G A +AV   
Sbjct: 190 ALACLG--AFAMLSQSRGAVLALVITVVMAPLWFRDRHSRVFSVLALLATGLAFLAVY-- 245

Query: 239 SEILLRGGLSYRPDLLLGAWERFLLHPWLGLGVGASYELEVAAIGATFEHAHNFFAHLAL 298
            +++ + G SYRP++     +    HPW GLG+GA YE  V+A+G  F+H HN F H+A+
Sbjct: 246 -DVIAQRGSSYRPEIFHAVVQMIAAHPWTGLGLGADYE--VSAVGMHFDHTHNMFTHVAV 302

Query: 299 QLGLPGLVLWLSTLLVVLWRGWSSRASAAGLALCGLLGFSVVALMTDGIGPWVKPREEWF 358
           ++GLPG++LW+   L  L     +R +  G  L G   +S +A+  D       PR EWF
Sbjct: 303 EMGLPGMLLWVMVWLFTLGEIVRARGTLFGKVLLGFWVYSTLAMQFDAASLTGTPRAEWF 362

Query: 359 TVWLPIFLCLALFAGRAD 376
             WLP+ L + L  GRA+
Sbjct: 363 ISWLPVGLAMLLPWGRAE 380