Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 185 a.a., recombinase family protein from Erwinia tracheiphila SCR3

 Score =  139 bits (350), Expect = 3e-38
 Identities = 77/177 (43%), Positives = 117/177 (66%), Gaps = 2/177 (1%)

Query: 6   IGYARVSTQGQDLDQQRSSLAQAGCQRIFEEKISGSKRDRPELGRVLDHLRAGDVLTVTR 65
           +GYARVST  Q+L+ QR +L  AGC++IFE++ISG+K +R  L  VL  +R  D L + R
Sbjct: 3   VGYARVSTDDQNLNLQRDALQLAGCEKIFEDQISGAKAERQGLHAVLQFVRTRDTLVIWR 62

Query: 66  LDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIADFERSLISE 125
            DRL+RS  DL+ + + L+    GL+SL E   DTTS +G ++  +F  +A+FER+L  E
Sbjct: 63  RDRLSRSLKDLIEMVKLLESNGIGLKSLQES-IDTTSSSGMLIFHLFGALAEFERNLTRE 121

Query: 126 RTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQ-SVSEVARLLCVHRATLYR 181
           RT AG  AA+ARG + G   AL+ ++ A A RL +E + +V+++  L+ + R T+Y+
Sbjct: 122 RTQAGLQAARARGRKGGCPKALNKDKQALAVRLYDERKHTVAQICELMGISRPTIYK 178