Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 195 a.a., recombinase family protein from Erwinia tracheiphila SCR3

 Score =  124 bits (310), Expect = 1e-33
 Identities = 76/180 (42%), Positives = 101/180 (56%), Gaps = 6/180 (3%)

Query: 8   YARVSTQGQDLDQQRSSLAQAGC----QRIFEEKISGS--KRDRPELGRVLDHLRAGDVL 61
           Y RVST  Q  + QR  +  AG     QR+ EE+ISGS    +RP   R+LD +  GDVL
Sbjct: 7   YCRVSTLEQTTENQRREIEAAGFTVKPQRLIEEQISGSVSASERPGFARLLDRMENGDVL 66

Query: 62  TVTRLDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIADFERS 121
            VT+LDRL R   D+    EQL +    +  LA    D TS AG+M + + + +A+FE+ 
Sbjct: 67  IVTKLDRLGRDAMDVRKTVEQLAKAGIRVHCLALGGVDLTSAAGKMTMQVISAVAEFEKD 126

Query: 122 LISERTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRATLYR 181
           L+ ERT +G A A+A G RFG  PAL+ EQ   A   +  G S+S VAR     R T+ R
Sbjct: 127 LLIERTHSGLARARAAGKRFGRPPALNNEQRQTALEQLMAGASISAVARQFGTSRQTIMR 186