Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 184 a.a., site-specific DNA recombinase from Escherichia coli ECRC100

 Score =  142 bits (359), Expect = 3e-39
 Identities = 82/176 (46%), Positives = 111/176 (63%), Gaps = 1/176 (0%)

Query: 6   IGYARVSTQGQDLDQQRSSLAQAGCQRIFEEKISGSKRDRPELGRVLDHLRAGDVLTVTR 65
           IGY RVST  Q+ + QR++L  AGC+ IFE+KISG+K DRP L ++L  L AGD L V +
Sbjct: 3   IGYVRVSTNNQNTELQRNALECAGCELIFEDKISGTKSDRPGLKKLLRTLSAGDTLVVWK 62

Query: 66  LDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIADFERSLISE 125
           LDRL RS   L+ + E+L+ER    RSL +   DT++P GR    +   +A+ ER LI E
Sbjct: 63  LDRLGRSMRHLVVLVEELRERGINFRSLTDS-IDTSTPMGRFFFHVMGALAEMERELIVE 121

Query: 126 RTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRATLYR 181
           RT AG  AA+A+G   G +P L+ EQ A A RL+  G    +VA +  V  +TLY+
Sbjct: 122 RTKAGLEAARAQGRIGGRRPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGISTLYK 177