Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 196 a.a., Rac prophage; putative site-specific recombinase from Escherichia coli BL21

 Score =  117 bits (294), Expect = 1e-31
 Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 6/185 (3%)

Query: 4   QQIGYARVSTQGQDLDQQRSSLAQAGC----QRIFEEKISGSKR--DRPELGRVLDHLRA 57
           Q   Y R+ST  Q  + QR  +  AG     Q+I EE ISGS    +RP   R+L  L+ 
Sbjct: 3   QIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKC 62

Query: 58  GDVLTVTRLDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIAD 117
           GD L VT+LDRL  +  D+    EQL E    +  LA    D TSP G+M++ + + +A+
Sbjct: 63  GDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAE 122

Query: 118 FERSLISERTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRA 177
           FER L+ ERT +G   A+  G RFG  P L+ EQ       ++ G S+S +AR     R 
Sbjct: 123 FERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQ 182

Query: 178 TLYRA 182
           T+ RA
Sbjct: 183 TILRA 187