Pairwise Alignments

Query, 545 a.a., cytochrome c oxidase, subunit I from Pseudomonas stutzeri RCH2

Subject, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

 Score = 82.0 bits (201), Expect = 5e-20
 Identities = 97/476 (20%), Positives = 192/476 (40%), Gaps = 54/476 (11%)

Query: 48  LLGGSMAMVIRAELFQPGLQIVQP-EFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMI 106
           +LG  + + I ++L  P L +  P   F ++  +H  +++F     A  G + +++    
Sbjct: 27  ILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAFGGCALFGTSYYVVQRTC 86

Query: 107 GAPDMALPRMNNFSFWLLPAAFGLLVSTLFMEGGGPNFGWTFYAPLSTTYAPESVTFFIF 166
               +    M  F+FW   A     + TL M       G+T     +    P ++     
Sbjct: 87  QTR-LISDSMAAFTFWGWQAVIVGALITLPM-------GYTTTKEYAELEWPLAI----- 133

Query: 167 AIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTM 226
              L+ I  +   +    TI+  +          ++V  W   AF+++  M     +V  
Sbjct: 134 ---LLAIVWVTYGLVFFGTIVKRKTKH-------IYVGNWFYGAFIVVTAM---LHIVNH 180

Query: 227 MLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAF-GAVSSIIPAFSRKPLF 285
           + + +    S+ + +G  D +    + W++GH  V   +   F G +   +P  + +P++
Sbjct: 181 ISLPVSLFKSYSAYSGATDAM----IQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIY 236

Query: 286 GYTSMVYATGAIAFLSFIVWA--HHMFTVGIPLTGELFFMYATMLIAVPTGVKVFNWVST 343
            Y   +    A+  ++  +WA  HH+    +P   +   M  ++++  P+   + N + T
Sbjct: 237 SYRLSIVHFWAL--ITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMT 294

Query: 344 M---WRGSLTFEAPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVP 400
           +   W   L  +  + F V  +  + +  F G M+AI   +   H T + + H H   + 
Sbjct: 295 LSGAWH-KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALG 353

Query: 401 GAIFGIFASAYYWLPKWTG--HMYDETLAKLHFWMSFIGMNLAFFPMHFVGLAG--MPRR 456
                   + Y+ +PK  G   M+   L   HFW++ IG  L    M   G+    M R 
Sbjct: 354 WVAMISIGAVYHMIPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRA 413

Query: 457 IPDYNMMFANF----------NMVSSVGAFMFGATQLLFLFIVIKCIRGGVPARAK 502
           I D   +  +F           +V ++G   F +  LL  + V + +R   PA+A+
Sbjct: 414 INDDGTLTYSFVEALQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAE 469