Pairwise Alignments

Query, 956 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 924 a.a., Adaptive-response sensory-kinase SasA from Xanthobacter sp. DMC5

 Score =  153 bits (387), Expect = 4e-41
 Identities = 132/382 (34%), Positives = 191/382 (50%), Gaps = 33/382 (8%)

Query: 318 RSRDSLHDQQLFLRRVVDTDD-NLIF---VRDAQGRFLLCNTALSALLDVRPQDIEQRHP 373
           R R    D +   RR++  D    IF    RD+    +   TA + L+D+    +E+R  
Sbjct: 556 RGRAHRADLEALARRLLGADTARQIFEDHARDSGTGDVADLTADARLVDI----VERRIA 611

Query: 374 DEV--PSARLLRPLLLDDDELAALASGSGELRTTEVALTDALGTEHWFQVIKRPLRTSAR 431
             V   SAR+L   + D++ L A     G++        D L      +V  R L   +R
Sbjct: 612 GAVGAASARVLVAAVADEEPLNA-----GDVM-------DILNEASQLRVYARALEEKSR 659

Query: 432 TCHVVTVAVDVSLR--RRMEQMKTEFISTVSHELRTPLTAIRGALGMLIGGIAGQVSDEA 489
           +  + +  +  +    R ++++K +F+S+V+HELRTPLTAIR AL  L+       +++ 
Sbjct: 660 SLEIASAELSAANAQLRTLDELKDDFMSSVTHELRTPLTAIR-ALSELMLDTPDMEAEQR 718

Query: 490 RPLLGIAHKNSERLVRLINDILDIEKLEAGRLTFNFGRHDVRPLVQQALSDITPYGQDYG 549
           +  L I    SERL RL+N +LD+ K+E+G   ++    D++ LV  A+       +  G
Sbjct: 719 QDFLRIIVGESERLGRLVNQVLDMAKIESGHAEWHSTDVDLKALVADAVKATAELARTKG 778

Query: 550 VSLEFLDAPELTSSEATLDPDRFAQVMANLLSNAIKHSPA-GGCVTVDLRRRGKLLEIGV 608
             +  L AP    S    DPDR  QVM NL+SNA K  PA GG + V L      LE+ V
Sbjct: 779 AEI-VLTAPASVPS-VKADPDRLTQVMLNLISNAAKFVPAQGGRIDVRLLADADGLEVQV 836

Query: 609 QDRGPGIPEAFRSRIFERFAQADSSDARQR-GGTGLGLAITRSLVQQMHGKIGFDCQPDQ 667
           +D GPG+P A R  IFE+F Q    DA  R  GTGLGL I+R +V    GKI  D +  +
Sbjct: 837 EDNGPGVPPADRDTIFEKFRQ--GGDALNRPPGTGLGLPISRRIVDHFGGKIWLDQKAGK 894

Query: 668 GTRFWLQLPLEEHPQQVQAPAQ 689
           G  F  +LPL    Q   AP Q
Sbjct: 895 GACFAFRLPLRS--QGANAPTQ 914