Pairwise Alignments

Query, 361 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  428 bits (1100), Expect = e-124
 Identities = 200/359 (55%), Positives = 268/359 (74%), Gaps = 2/359 (0%)

Query: 5   LKSLLVAAAMTGAATAQAA-SVHIYNWSDYIGETTLEEFEKETGIKPVYDVFDSNETLEG 63
           +K++ +   M  A+  QAA +V IYNWSDYI   T + F+KETGI   YDV+DSNETL+G
Sbjct: 1   MKAIALLPLMLVASIGQAAETVKIYNWSDYIAPDTTKNFQKETGIGFTYDVYDSNETLDG 60

Query: 64  KLLAGRSGYDVVVPSNHFLGKQIRAGAFQALDKSKLPNWEHLDPALLKQLQKNDPGNAHA 123
           KL+ G+SGYDVV PSNHF+ +QI+ GA + LDKS+LPNW++L+P LLK L+ NDPGNAH 
Sbjct: 61  KLMTGKSGYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDPGNAHG 120

Query: 124 APYLWGTNGIGYNVEKVKAALGVDE-IDSWSVIFEPENAAKLASCGIAFLDSADEMIPAM 182
            PYLWG+ GIGYN++KVKA LG +  +DSW +IF+PEN AKL  CG+A LD+  E++PA 
Sbjct: 121 FPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAA 180

Query: 183 LNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQA 242
           LNYLGL  +S+   DY+KAE+ L+ VRP+V YFHSSKY +DLANG+ICVA GFSGD+ QA
Sbjct: 181 LNYLGLPHHSKKPEDYKKAEDLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQA 240

Query: 243 AARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVEEAHAFINYLLRPEVIAAVSDY 302
            +RA+EA  G+ I Y IP EGA +WFDM+A+PADA N    +AF+NYLLRP+V+A++++Y
Sbjct: 241 ESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMASITNY 300

Query: 303 VGYANPNLKAGELMDQEVREDASVYPPQEVLDRLYVSAELPPKIQRLMTRTWTKVKSGK 361
           V YAN N  A  L+D  ++ D  +YP  E++ +L+    +P  I R+ TR W  +++GK
Sbjct: 301 VHYANGNQAADSLVDPAIKADTKIYPSPEMMGKLFALEAMPLNIDRVRTRVWNTIRTGK 359