Pairwise Alignments

Query, 300 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

Subject, 269 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 2e-39
 Identities = 93/261 (35%), Positives = 148/261 (56%), Gaps = 12/261 (4%)

Query: 7   SNLILVLGLL--FIYLPMVILVIYSFNASR-LVTVWGGWSLKWYAGLLDNSQLMGAVMRS 63
           + L L  G++  F+ LP+V +V+ SF +S+ LV    GW+ KWY     N + M A + S
Sbjct: 14  TGLYLTTGVIAAFLLLPVVFIVLLSFGSSQWLVFPPPGWTFKWYGQFFSNPEWMDAALAS 73

Query: 64  LEVAAYTAVAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLLFVAM 123
           L+VA  T +AAV LG  +AF L R   F GR L  GL T P+++P VI  +++  LF+ +
Sbjct: 74  LKVAVLTTIAAVLLGLPSAFALVR-GRFPGRELLYGLFTMPMIVPLVIIAVAVYALFLKL 132

Query: 124 AQLVGWPAQRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKVFFLI 183
               G+     L    ++H      +  + ++  L+  D SIE+AA+  GA   +  F +
Sbjct: 133 ----GYTGT--LFAFVVSHVIVALPFTIISIINSLKLFDQSIEDAAVICGASRLQAIFKV 186

Query: 184 TMPMIAPSLAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAVRLGVKPEINAVASL 243
           T P I P + AGG+ +F +S D++VL+  ++ P   TLP+++++ +R  + P I AVAS 
Sbjct: 187 TFPAIRPGMIAGGLFAFLVSWDEVVLSVMMASPDLQTLPVKMWTTLRQDLSPVI-AVAST 245

Query: 244 ILLSVS-LATFLAWYLTRRAE 263
           +L+ +S L  F+A  L RR E
Sbjct: 246 LLIGLSLLVMFIAAALRRRTE 266