Pairwise Alignments

Query, 300 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

Subject, 268 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  143 bits (361), Expect = 4e-39
 Identities = 89/250 (35%), Positives = 140/250 (56%), Gaps = 11/250 (4%)

Query: 14  GLLFIYLPMVILVIYSFNASRLVTVWG--GWSLKWYAGLLDNSQLMGAVMRSLEVAAYTA 71
           GLLF++ P++I+ +Y+FN       +   G++LKW         ++ A+  SL+VA    
Sbjct: 17  GLLFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIDVAFTRPDVLEAIKLSLQVACLAT 76

Query: 72  VAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQLVGWPA 131
           + A+ LGT+A+  L R   F G+     ++  P+ +P +ITG++LL  F  +        
Sbjct: 77  LIALVLGTLASAALYRRSFF-GKESISLVLILPIALPGIITGIALLSAFKTLG------I 129

Query: 132 QRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKVFFLITMPMIAPS 191
           + G+ TI + H TFC   V   V+ARLR    S+ EA+MDLGA  W+ F  I +P +  +
Sbjct: 130 EPGVFTIVVGHATFCVVIVYNNVIARLRRTSQSLIEASMDLGADGWQTFRYIVLPNLGSA 189

Query: 192 LAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAV-RLGVKPEINAVASLILLSVSL 250
           L AGGML+FALS D++++ +F +G    TLP+ + + + R    P  N VA L++L   L
Sbjct: 190 LLAGGMLAFALSFDEIIVTTFTAG-HERTLPIWLLNQLSRPRDVPVTNVVAMLVMLVTML 248

Query: 251 ATFLAWYLTR 260
               A+YLTR
Sbjct: 249 PILGAYYLTR 258