Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

Subject, 589 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  649 bits (1675), Expect = 0.0
 Identities = 333/594 (56%), Positives = 418/594 (70%), Gaps = 9/594 (1%)

Query: 1   MADYQAPLRDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNR 60
           M +Y+APLRDMRF+++ VFD    + AL A     D     AILEE  K   N +APLNR
Sbjct: 1   MPEYKAPLRDMRFLIDNVFDFHGHYAALGATDASPDM--VSAILEEGAKFCENVLAPLNR 58

Query: 61  SGDEEGCRWDAGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNS 120
           SGDEEGC ++ G V+TP G++EA+  Y +GGW GV  DPA+GG G+P+ +   + EM+ S
Sbjct: 59  SGDEEGCHFENGVVTTPKGFKEAFAQYVEGGWHGVAADPAYGGQGLPQSLGLVLSEMIGS 118

Query: 121 ASLAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRT 180
           ++ ++G+YP LT GA  +I+AH + E K  +L  + AG W+G+MCLTE H GTDLG+I+T
Sbjct: 119 SNTSWGMYPGLTHGAMSAIHAHGTAEQKDTFLSKLTAGEWTGTMCLTEAHCGTDLGLIKT 178

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNE 240
           +A PQADGSY V+G+KIFI+ GEHD++ NIIHLVLAKLPDAPAG++GISLF+VPK   + 
Sbjct: 179 RAVPQADGSYAVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKFHADS 238

Query: 241 DGSLGERNSLSCGSIEHKMGIQASATCVMNFDGAVGWMVGEPNKGLAAMFTMMNYERLGV 300
               GERN++ CGSIEHKMGI+ SATCV+NFDGA G+++GE NKGL  MFTMMN+ RLG 
Sbjct: 239 ----GERNAVHCGSIEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHARLGT 294

Query: 301 GIQGLATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEG 360
           G+QGL  GE S+Q AI+YA DR+Q R+ TG  A DKAADPIIVHPDVRRMLLTMKA NEG
Sbjct: 295 GMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPDKAADPIIVHPDVRRMLLTMKAFNEG 354

Query: 361 GRAFSSYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGH 420
            RA + + A  LD A  S D   RQ AE  +A LTP+ KAF+TD GLE T HG QVFGGH
Sbjct: 355 NRALTYFTAQLLDTAHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGH 414

Query: 421 GFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMYQAFVDEIRAFIADAG 480
           G+IREWG EQL RD RI  IYEGTNGIQALDL+GRK++GS G + + F   +  F A   
Sbjct: 415 GYIREWGMEQLARDARIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAAHA 474

Query: 481 --PELTEFAEPLKAAMDNLDELTAWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARM 538
             P+L  +   L        ELT  V   A  NP+E+GAA+V+YL   GY   AY+W RM
Sbjct: 475 EHPQLKAYVAQLNQLNGEWGELTTKVGMAAMKNPDEVGAAAVDYLMYSGYVVLAYLWLRM 534

Query: 539 AAVAVAKREEGDFYQSKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592
            A+A A++ + DF ++KL T  FYF RLLPR  +  A+V+AGSE L  L A  F
Sbjct: 535 -AIAAAEQPDTDFAKAKLATCDFYFKRLLPRTATHRAAVEAGSECLMSLPAEAF 587