Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  360 bits (924), Expect = e-104
 Identities = 226/586 (38%), Positives = 312/586 (53%), Gaps = 14/586 (2%)

Query: 9   RDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNRSGDEEGCR 68
           R++ F L EV DA  L    P  AE    ET DA L  A  I     AP NR  DE   R
Sbjct: 9   RNLAFELYEVLDAEAL-TLRPRFAEH-SRETFDAALTTARTIAEKYFAPHNRKADENEPR 66

Query: 69  WDAGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNSASLAFGLY 128
           +  G        + A   + + G++    D   GGM +P ++S        +A+     Y
Sbjct: 67  YVDGRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAY 126

Query: 129 PMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRTKAEPQADG 188
           P LT GA   I +  S+E K+ +L  M  G + G+M LTEPHAG+ L  IRT+AEP  DG
Sbjct: 127 PFLTMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDG 186

Query: 189 SYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNEDGSLGERN 248
           SY++ G KIFI+GG+H+L+ENI+H+VLAKLPDAP G +GISLF+VPK  VN +GS G RN
Sbjct: 187 SYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPRN 246

Query: 249 SLSCGSIEHKMGIQASATCVMNFDG---AVGWMVGEPNKGLAAMFTMMNYERLGVGIQGL 305
            +    + HKMG + + +  +NF      VG++VG+P++GLA MF MMN  R+GVG+  +
Sbjct: 247 DVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAV 306

Query: 306 ATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEGGRAFS 365
             G   Y  ++EYAR R Q R P        A  PII H DV+RMLL  KA  EG     
Sbjct: 307 MLGYAGYLYSLEYARQRPQGRLPDNKDPHSPAV-PIIEHTDVKRMLLAQKAYVEGAFDLG 365

Query: 366 SYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGHGFIRE 425
            Y A   D    + D+ AR+ A+  + LLTP+ K++ +   L+      Q+ GGHG+ RE
Sbjct: 366 LYAARLFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTRE 425

Query: 426 WGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMYQAFVDEIRAFIADAG--PEL 483
           +  EQ  RD R+  I+EGT GIQ+LDL+GRK+    G   +  +  I A    A   P L
Sbjct: 426 YPVEQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPNL 485

Query: 484 TEFAEPLKAAMDNLDELT-AWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARMAAVA 542
               +PL+   + L  +T A + D A+       A S  YL  FG+    + W   A  A
Sbjct: 486 DPLRQPLEQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRWLEQAVHA 545

Query: 543 VAKREEG-----DFYQSKLGTARFYFARLLPRIHSLSASVKAGSES 583
                +G     DFY  KL  AR++    +P  H+  A ++A  ++
Sbjct: 546 ELGMLKGTAADRDFYLGKLQAARYFLTWEVPGCHNELALLEAHDDT 591