Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  607 bits (1564), Expect = e-178
 Identities = 310/596 (52%), Positives = 406/596 (68%), Gaps = 14/596 (2%)

Query: 3   DYQAPLRDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNRSG 62
           +YQAPLRDMRFVL+E+FD     Q L      +D +T D ILEEA + T   IAPLNR+ 
Sbjct: 2   NYQAPLRDMRFVLHELFDLSGHCQQLGI---ELDRDTLDGILEEAARFTGQIIAPLNRNS 58

Query: 63  DEEGCRWDAGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNSAS 122
           DE+GC+W  G V+TP G R+AY+ Y + GW  + G  A+GG G+P++ SA   EM+ +AS
Sbjct: 59  DEQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAAS 118

Query: 123 LAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRTKA 182
           L+F +Y  LT GA L+++ H SE LKQ YL  M +G W+G+MCLTEP AGTDL ++RT+A
Sbjct: 119 LSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRA 178

Query: 183 EPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNEDG 242
           +P+ADGSY+++G+KIFI+GGE DLT+NI+HLVLA+LPDAPAG RGISLFLVPK++     
Sbjct: 179 QPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG--- 235

Query: 243 SLGERNSLSCGSIEHKMGIQASATCVMNFDGAVGWMVGEPNKGLAAMFTMMNYERLGVGI 302
             GERN+L CG++EHKMGI+ ++TCVMNFDGA GW+VGE N+GLA MFTMMN  R  VG+
Sbjct: 236 --GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGL 293

Query: 303 QGLATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEGGR 362
           QGL   E ++Q  + YAR+R+QSR+  GPVA +K ADPIIVHPDVRRMLLT K L EG R
Sbjct: 294 QGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCR 353

Query: 363 AFSSYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGHGF 422
               Y A QLD+   +    ARQ A  + ALL P+ KAF TD+G E    G QV+GGHG+
Sbjct: 354 MLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGY 413

Query: 423 IREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMYQAFVDEIRAFI--ADAG 480
           IREWG EQL+RD RITQ+YEGTNGIQALDL+ RK++G GG      +DE+   +  A+A 
Sbjct: 414 IREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANAL 473

Query: 481 PELTEFAEPLKAAMDNLDELTAWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARMAA 540
             L   A  +   ++    L+  V++  + +P E GA SV++L    Y   A MW + A 
Sbjct: 474 GGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAV 533

Query: 541 VAVAKREEGD----FYQSKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592
            A A    G     FY++KL  A FY+ R+LPR  +   ++  G++ L  L A+ F
Sbjct: 534 RAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589