Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  629 bits (1621), Expect = 0.0
 Identities = 314/598 (52%), Positives = 412/598 (68%), Gaps = 7/598 (1%)

Query: 1   MADYQAPLRDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNR 60
           M DY+APLRD+RFV +E+      +Q+LP   +    +  DAILEE  K     ++PLNR
Sbjct: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATP-DMVDAILEEGAKFCEQVLSPLNR 59

Query: 61  SGDEEGCRWDAGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNS 120
            GD+EGC W    V TP G++EAYQ + +GGW  +  D   GG G+P+ +   + EM+  
Sbjct: 60  VGDQEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGG 119

Query: 121 ASLAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRT 180
           ++ ++G+YP L+ GA  +I AH + E +  YL  + +G W+G+MCLTEPH GTDLG++RT
Sbjct: 120 SNWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRT 179

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNE 240
           KAEPQADGSYKVSGTKIFI+ GEHD+ +NI+H+VLA+LPDAPAG++GISLF+VPK + N 
Sbjct: 180 KAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNA 239

Query: 241 DGSLGERNSLSCGSIEHKMGIQASATCVMNFDGAVGWMVGEPNKGLAAMFTMMNYERLGV 300
           +G +GERN +SCGSIEHKMGI  +ATCVMNFD A G+++G  NKGL  MFT MN  RLG 
Sbjct: 240 EGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGT 299

Query: 301 GIQGLATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEG 360
            +QGLA  E ++Q  ++YAR+R+Q R+ TGP A DKAADPIIVHPDVRRMLLTMKA  EG
Sbjct: 300 ALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEG 359

Query: 361 GRAFSSYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGH 420
            RA   + A Q+DI K+S D+E R++A+A +A LTP+AKAF+T++G E   HG Q++GGH
Sbjct: 360 NRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGH 419

Query: 421 GFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMYQAFVDEIRAFI-ADA 479
           GFI EWG EQ VRD RI+ +YEGT GIQALDL+GRK++ + G   + F   +  F  A  
Sbjct: 420 GFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQE 479

Query: 480 GPE-LTEFAEPLKAAMDNLDELTAWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARM 538
           G E + EF EPL A      ELT  V   A  +  E+GAASV+YL   GY   AY WA +
Sbjct: 480 GNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADI 539

Query: 539 AAVAVAKREEGD----FYQSKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592
           A +A  K   G     FY +KL TARFYF R+LPR  +  A++ +G+ +L  +D   F
Sbjct: 540 ARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEEHF 597