Pairwise Alignments

Query, 429 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 93/276 (33%), Positives = 128/276 (46%), Gaps = 38/276 (13%)

Query: 160 ALQADWLQLIQLAYPAFLAALVLLTMQYLRQPRPSHAAQIVGLVGVL---LMLPQTFSRG 216
           A QA   +L  L +   +A LV L +  +     +  AQ  GLV  L   +ML  T    
Sbjct: 18  ATQAGRRRLGPLEFSVRIACLVTLIVIVMCTGGLTLLAQF-GLVTDLFNGIMLSVTLGGA 76

Query: 217 AALNV------LSSHVLLMLVAAIAHEAYL-MAFRDELTGLPGRRALNERLQRLGRQYVL 269
            A  V      L++  + +LV +  HE +L ++  D LTGL  R  L      LG  Y +
Sbjct: 77  VAFTVTLLVCWLNAREVQILVQS--HERFLHLSHTDALTGLSNRLGLYAACAELGSDYCV 134

Query: 270 AMADVDHFKRFNDTYGHDVGDQVLKMVASRLRK-IGGGGRAYRYGGEEFTLVFSGRSVEE 328
           A  D+DHFK  ND Y H VGD V+  VA R+++         R GGEEF +V    S   
Sbjct: 135 AFLDIDHFKAVNDGYSHLVGDLVIASVARRIKEHFDPPAHVARLGGEEFVVV-QETSPLA 193

Query: 329 CLPHLEAIRQSVESYALQLRDASSRPKDDRLGRTARGKVSTSQVSVTISIGVAERQGEQR 388
            L   E +R ++E+  +  +D                     +++VTISIGVA R G+  
Sbjct: 194 FLQMCERVRAAIETTPVAYQDL--------------------RITVTISIGVAFR-GDAE 232

Query: 389 TPDEVIKAADQALYGAKKAGRN--CVRVHGSGRGAV 422
             D+V+  AD ALY AK  GRN  C+  H   R AV
Sbjct: 233 IFDKVMHNADLALYRAKGGGRNRVCMSGHVERRQAV 268