Pairwise Alignments

Query, 541 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 4e-63
 Identities = 154/514 (29%), Positives = 253/514 (49%), Gaps = 37/514 (7%)

Query: 46  TYAELGSRADAFARYLRYHAGLQPGDRLALQLPNCLQYPIAVFGALKAGLVIVNTNPQYT 105
           ++ +L  + + +AR L    G+  GDR+ +  PNC Q+ I    + K G ++VN NP Y 
Sbjct: 47  SWRQLAEQVEIYARAL-IALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYR 105

Query: 106 AAEARHQFHDSGAKAIL------------VLDRLLPQVRAVQADTALRQIILTSVDDLQQ 153
             E  +    SG + ++            ++  L+P++    A  A  ++    + +L+ 
Sbjct: 106 VGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPEL----ASAAPGELASECLPELRG 161

Query: 154 PI--YESQEDGTLRFMQ-ALRLG----EQRSPVQREAGLDRLALLQYTGGTTGVSKGAML 206
            I    +   G L +   A R G    E  +  Q+    D+   +QYT GTTG  KGA L
Sbjct: 162 VISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATL 221

Query: 207 THRNLLANVLQTIELFDQPGLLEPEKDVRIAPLPLYHIMAFATNCLSSVGMGLHTVFIRD 266
           +H N+L N     E      L    +D  + P+PLYH        L  +  G   ++  D
Sbjct: 222 SHYNILNNGFMVGE-----SLGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPND 276

Query: 267 GRNLDETIGAMQRHPFSLLSGINTLFVGLMNHPEFRSIDFSHLKWATSGGAPLNSEVGRR 326
             + + T+ A+     ++L G+ T+F+ +++HP    +D S L+     GA    EV RR
Sbjct: 277 AFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRR 336

Query: 327 -WQALTGAPIREGFGLTEASPV-VATGTQLS-PYREGYIGQALIETELRTVDDEGNDVPP 383
               +  A ++  +G+TE SPV + TG       R   +G+   + E + VD +G  VP 
Sbjct: 337 VIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPR 396

Query: 384 ETPGELWLRGPQVMQGYWQRPDETAKVLTPDGWLKTGDIALLDVDGFVKIVDRKKDMILV 443
              GEL  RG  VM GYW  P  TA  + P GW+ +GD+A++D  G+V+IV R KDMI+ 
Sbjct: 397 GEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIR 456

Query: 444 SGFNVFPNEIEDVLMQHPSVRECVAVGVPDARKGEAVKVFVSL---KDDTVDERALLEHC 500
            G N++P E+E+    HP+V +   +G+P +R GE +  ++ L      TV+E  L   C
Sbjct: 457 GGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEE--LQGWC 514

Query: 501 RQYLTGYKMPSFLELRDELPKTAVGKLLRRQLRD 534
           +  +  +K+P ++   DE P T  GK+ + ++R+
Sbjct: 515 KARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMRE 548