Pairwise Alignments

Query, 172 a.a., type VI secretion system effector, Hcp1 family from Pseudomonas stutzeri RCH2

Subject, 392 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 1   MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQILVQAFQHQVIIPRDPQSGQPT 60
           M    YL++ G +QG I+AG  T +S GN +Q GHED+I   +  + +       +    
Sbjct: 1   MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNI-------NNTGL 53

Query: 61  GQRVHKPLMITKVFDKSSPLIFNALTSGERLNKCRLEWYRTSSTGTQEHYFTIELEDAVI 120
           G + H  +   K+ DKS+PL  N++ + E+L     ++YR +  G  E Y+ I+L  A +
Sbjct: 54  GSQFH-GITFCKLIDKSTPLFINSINNNEQL-FMGFDFYRINRFGRLEKYYYIQLRGAFL 111

Query: 121 VDVQSRMPNCQDPNMSHFTHLEDVYFTYRKIVWTHEVSGTSGS 163
             +  ++       + +    E +  +Y  I+  H ++ T  S
Sbjct: 112 SAIHHQI-------IENQLDTETITISYEFILCQHLIANTEFS 147