Pairwise Alignments

Query, 684 a.a., Rhs element Vgr protein from Pseudomonas stutzeri RCH2

Subject, 618 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  371 bits (953), Expect = e-107
 Identities = 221/624 (35%), Positives = 336/624 (53%), Gaps = 34/624 (5%)

Query: 10  FTLSLEGI-EHDFKVLELQGREAISQPYRFDLELVSERSDLDLESLLHRPAFLALAPVGS 68
           FT+ +  + E  F V++ +  EA++QP+   L L S ++D+D  ++L +P  L +   G 
Sbjct: 9   FTVKVGALPETTFAVVDFELSEALNQPFALSLNLASSQADIDFGAVLDQPCELRVWYEGE 68

Query: 69  ---GIHGLVHQAAQGESGQRLTRYRLTLVPQLAYLAHRINQRIFQHLTVPQIIAQVLEEH 125
               + G+V + AQG++G R TRY+  + P L  L  R N R+FQ      II+ +LEE 
Sbjct: 69  LQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQTRKPDAIISTLLEEA 128

Query: 126 GIQADAYRFQLGPVIYPAREYCVQYDETDLHFIQRLCEEEGIHYHFQHGASGHVLVFGDD 185
           GI   A+  +     + AREYCVQY E+DL FI RL  EEG+ Y  +  A  H +VF DD
Sbjct: 129 GITDFAFALRHD---HAAREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGKHRVVFADD 185

Query: 186 QTVFARLAATAYQQDSGLVADQPVIKRFGLRLETRPSHVTRRDYDFEKPRLSMEAAFHSD 245
               ++     +   +  +++   ++RF        + V  +DY F+ P   +    H+ 
Sbjct: 186 AGALSKGPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGL---LHNR 242

Query: 246 FQPDLED-------YDYPGRFTERARGKHLSQRALERHRHDYELAEGESDQPQLASGHFL 298
              +L+        +DYPGRF +   GK  +   L+  R       GES+   L  G   
Sbjct: 243 MSSELDHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAALMPGSSF 302

Query: 299 PLGEHPRSDWNQLWLLTEVLHEGKQPQVLEESVTSDSQSRDGFTQGYRNHFTATPWDIPF 358
            L EHP + +N  W +  V H G+QPQ LEE    +  +         N F        +
Sbjct: 303 TLTEHPNAAFNLAWQVVAVTHSGQQPQALEEESGGEPTTLS-------NRFEVVKATTTW 355

Query: 359 RPALRHPKPKVLGSQTAVVTGPAGEEIHCDEYGRVRVQFHWDREGQADDKTSCWLRVSSS 418
           R A+ + KP+V G Q A V GPAGEEI+CD+YGR+++QF WDR G +DD++SCW+RVS  
Sbjct: 356 RAAMPY-KPRVDGPQIATVVGPAGEEIYCDQYGRIKLQFPWDRYGASDDQSSCWVRVSQG 414

Query: 419 WAGDRYGGIAIPRVGMEVLVTFLEGDPDQPLVTGCLYHKEHQVPYDLPANKTRTVLKTLS 478
           WAG +YG IAIPR+G EV+V+FLEGDPDQP+VTG  +H  +  PY LPANKTRT L+T +
Sbjct: 415 WAGGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTRT 474

Query: 479 SPGGGGYNELRIEDRKGQEQIYIHAQRDWDENIEHDQKVRVGHERHDTVDANSYSEYRAE 538
              G G+NELR ED+ GQE+++IHAQ+D +  + +++   V     + V  +     +  
Sbjct: 475 HK-GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHSENVGGDQTVVVQHN 533

Query: 539 EHRTTHADRKTEIRANDHLTVGNSQQLKIGTGQFVEAGQEIHLSSGLKVVLEAGSELTFK 598
           +  +   ++ T I+   ++ VGN +Q  + T   +         SG   V+  G  +   
Sbjct: 534 QTVSIEQNQHTGIKGTQNINVGNGRQTSVTTTDTLTV-------SGDVTVVSTGGNIRLS 586

Query: 599 AGGSFIKLDASG-ITMVGPLIRMN 621
             G +I +D +G I++VG  + +N
Sbjct: 587 TAGGYISIDHAGDISIVGNHLMLN 610