Pairwise Alignments

Query, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 273 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 2e-39
 Identities = 93/249 (37%), Positives = 123/249 (49%), Gaps = 8/249 (3%)

Query: 11  QRSIPVMDALPRPLFARSESLAERTTTPRHNHPWAQLSYAISGVLRVHTERGRFLAPPQR 70
           Q ++PVM AL   + AR+  +      P H HP  QL  A+ G +        ++ PPQ 
Sbjct: 14  QLTVPVM-ALRVDVEARAREI------PIHQHPMGQLVIALRGAVSCEVPGTLWMVPPQA 66

Query: 71  AILIPPGLLHEVISSPQTEMRSLYIDQRVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDY 130
            + IP G  H    +    +  L++        P  C  LA+SP+L E+I+    L   Y
Sbjct: 67  GVWIPGGTPHSNHGTANALIFYLFVAPGAAT-LPTKCCTLAISPMLSEMIQHLAGLAPTY 125

Query: 131 DEQGADGRLAAVILDQLRAAPELSYSLPWPDDARLRGICEALYEQPDLSLSLAQWSERLH 190
           +   A  RLA V+LDQL A P   +SLP P DARLR I  A+   P    +L  W+    
Sbjct: 126 EPGSATDRLAHVLLDQLAAMPNEDFSLPMPQDARLRKISHAITLDPSDRRTLQDWAAETG 185

Query: 191 ISEKTLTRQFQRDTGLSFRAWRQRLRLLSALPLLERGQPVTDVALACGYESTSAFIAAFG 250
            SE+TL R     TGLSF  WR++L ++ AL  L  G  V  VA   GYES SAFI  F 
Sbjct: 186 ASERTLNRLCTAQTGLSFGRWRRQLHMIVALRELSGGATVQQVAYGLGYESPSAFITMFK 245

Query: 251 QQFGTTPGA 259
           + FG  P A
Sbjct: 246 KAFGKPPAA 254