Pairwise Alignments

Query, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  343 bits (879), Expect = 9e-99
 Identities = 195/437 (44%), Positives = 271/437 (62%), Gaps = 10/437 (2%)

Query: 35  EAACDFLQVGLRRQGCKVERYDDLDGLVKAAI-DQFSLIFVVVGSLPARSLYAQVEALTR 93
           +A  D L++G    G   +     +  ++A + D FSL+   V ++P    +  +  L R
Sbjct: 16  QALGDTLEIG----GFAYQAVGSAEEALEAVLEDAFSLVVSDV-NMPGMDGHQLLSQLRR 70

Query: 94  RARNVSVIPVVEYADQEKAAALLEIGCVDYLLSPFSEAQLAALLRRQVCAE-TAQESFVS 152
           +   + V+ +  +A  E+A   +  G  DYL+ PF    L  L+ R      T +E  V+
Sbjct: 71  QQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAGRVTGEEGPVA 130

Query: 153 CSQAGRRLLAMAQRVSLTRAPILITGETGTGKELMARYIHRFSASPDAPFIAVNCAAIPE 212
           C  A R+LL +A RV+ + + +LI+GE+GTGKE++ARYIH+ S     PF+A+NCAAIP+
Sbjct: 131 CEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPFVAINCAAIPD 190

Query: 213 QMLESILFGHEKGAFTGAVSAQPGKFELANGGTLLLDEIGELPLGLQAKLLRVLQEQRVE 272
            MLE+ LFGHEKGAFTGA++AQ GKFE A GGTLLLDEI E+P+ LQAKLLRVLQE+ VE
Sbjct: 191 NMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKLLRVLQEREVE 250

Query: 273 RLGGRREIELNVRIIAATNRDLQQEVAEGRFRADLMFRLDVLPLHISPLRERKEDVLPLA 332
           R+GGR+ I L++R++A TNRDL  EVA GRFR DL +RL V PL   PLRER  D+L LA
Sbjct: 251 RVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLRERPGDILQLA 310

Query: 333 RRFIGKYAPQEAHDELLTEDACRALLQ-HDWPGNARELENTVQRALVLRNGLFIQPQDLG 391
            R + ++  +  H  +    A RA LQ + WPGN REL+N +QRAL+L+ G  I+  D  
Sbjct: 311 ERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALILQQGGVIEAADFC 370

Query: 392 LAAPAAASVRVEKPLTLAAENGKAALRASGKWAEYQHVIDTIRRFDGHKTKAAASLGMTS 451
           LA     S   E  L + A+ G   L    +  EYQ +IDT+R   G + +AA  LG++ 
Sbjct: 371 LAGAIPLSAGTEPSLEVVADAG--GLGDDMRRHEYQMIIDTLRAERGRRKEAAERLGISP 428

Query: 452 RALRYRLNAMREQGIEL 468
           R LRY+L  MR+ G ++
Sbjct: 429 RTLRYKLAQMRDAGFDV 445