Pairwise Alignments

Query, 355 a.a., Flagellar motor switch protein from Pseudomonas stutzeri RCH2

Subject, 339 a.a., flagellar motor switch protein from Pseudomonas putida KT2440

 Score =  165 bits (418), Expect = 1e-45
 Identities = 101/318 (31%), Positives = 180/318 (56%), Gaps = 2/318 (0%)

Query: 29  VSSLDQAAILMLSMGDEISAGILRNFSREEIISISQAMARLSNVKQPMVSDVISRFFDDY 88
           +S +D+AAIL+LS+G+  +A +LR+   +E+  +  AMA++ NV +  V  V+S F D  
Sbjct: 11  LSRVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMGNVHRDQVEQVMSEFVDIV 70

Query: 89  KEQSSIKGASRSYLAGMLGKALGGDITRSLLDSIYGEEIRAKMAKMEWLDPKQFAALIAK 148
            +Q+S+   S +Y+  ML +ALG D    L+D I      + +  ++W++P+  A +I  
Sbjct: 71  GDQTSLGVGSDAYIRKMLNQALGEDKANGLVDRILLGGNTSGLDSLKWMEPRAVADVIRY 130

Query: 149 EHAQMQAVFLAFLPPGMATEVLECMPAERQDELLYRIANLSEVNSDVIAELEQLIDRSLK 208
           EH Q+QA+ +A+L P  A EVL     + + +++ R+++L+ V    + EL Q++++   
Sbjct: 131 EHPQIQAIVVAYLDPDQAGEVLSNFDHKVRLDIVLRVSSLNTVQPAALKELNQILEKQFS 190

Query: 209 VLSTQG-SQVRGVKQAADIMNRFKGN-RDQMFELLRAHNEELVGKIEDEMYDFFILSRQN 266
             S    + + G+K+AADIMN    +    + + +R  + +L  +IED M+ F  L+  +
Sbjct: 191 GNSNAARTTLGGIKRAADIMNFLDSSVEGALMDAIREIDSDLSEQIEDLMFVFNNLADVD 250

Query: 267 QDVLQTLLEVIPLDEWVVALKGAEPELVKAIQGAMPKRQAQQMESINRRQGPVPLSRVEQ 326
              +Q LL  +  D  VV+LKGA+  +   I   M KR ++ +      +GPV +S VE 
Sbjct: 251 DRGIQALLREVSSDVLVVSLKGADERVKDKIFKNMSKRASELLRDDLEAKGPVRVSDVET 310

Query: 327 VRKDIMAVVREMSADGEL 344
            +K+I+ + R M+  GE+
Sbjct: 311 AQKEILTIARRMAEAGEI 328