Pairwise Alignments

Query, 422 a.a., Flagellar capping protein from Pseudomonas stutzeri RCH2

Subject, 452 a.a., flagellar filament capping protein from Pseudomonas putida KT2440

 Score =  132 bits (332), Expect = 2e-35
 Identities = 115/425 (27%), Positives = 196/425 (46%), Gaps = 33/425 (7%)

Query: 15  LATYEVQSSLDRLNRNESNYKTQRDALSKLRTSLTTFKSAVSGLKTGKATMLVNSATTSQ 74
           LA  E      ++   +    TQ  A+  ++ +L TF+SA++ L T  +   + + T+S 
Sbjct: 22  LADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRSAIAKLNTSTSFTGL-AGTSSD 80

Query: 75  EGYVSATVGAKAQAGSYQFYVEQLASKQQVAVQGLVDGALSGTLNLKD-QTFNLGAY--- 130
           E    ATV A A AG+Y   V QLA+  ++       G  S   N  D QT  +      
Sbjct: 81  EKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVSSVVNNSGDPQTLTISQSSAD 140

Query: 131 --------ATLEDAAKAINAS-ADLGVQATLVRSNGEVSLVLTSTESGTANAFAHSLTGT 181
                   ATL+     IN      G+ A ++       LV++S+ +G  +    +L+G 
Sbjct: 141 YNVTIPDGATLQQVRDLINKQLGSQGINANILTDAKGSRLVMSSSTTGEGSDI--TLSGD 198

Query: 182 AATTTTLSTAADARIRMGGSFGVGGIELTSSSNTFDNVIEGVSLSVNKVHKDGDPALTLT 241
           ++     +  A A+      + + G+EL S SNT    I GV+  +    K       L+
Sbjct: 199 SSLVQNATPGAPAQ---NAKYTIDGLELESKSNTVTGAISGVNFELLAEGKS-----RLS 250

Query: 242 IDQDKSATKGKAQSFVDAFNALMTSFDS---LTASGSDSSAR-GALAGDSSVRAIEGRLN 297
           +  + +  K   QSFV A+NAL+T+ ++   +TA+G  S+   GAL GD+++RA+   + 
Sbjct: 251 VATNTTTLKTSVQSFVSAYNALITAINTQTKVTATGDASTTTAGALTGDATMRALVSTVR 310

Query: 298 TLLRTDFGGNS---LINFGISADRN-GKLTIDTARFEAAVAKDPAGFEALFTGKDNLLDS 353
             L    G  S   L   GI+ D+  G L +D  +++ AVAK  A   A+FTG   L+  
Sbjct: 311 NELVKSTGAGSISMLSQMGINTDQQTGLLVLDDTKWDKAVAKGAADIAAVFTGDKGLIKR 370

Query: 354 IDKTVASYTSSTNGMLKNRMDTLDMNLRRTNEQFDKLQQQYDSHYSRYLKQFTSMMQTMQ 413
           +     +YT +T G+L  R   L+ NL    +Q + L ++ ++  +    ++ +M   + 
Sbjct: 371 MTAATDAYTGTT-GILATRTKNLNDNLTELTKQQEALDRRIETLTATLTAKYNAMDTLVA 429

Query: 414 NMEQT 418
            +  T
Sbjct: 430 KLNAT 434



 Score = 38.1 bits (87), Expect = 5e-07
 Identities = 72/283 (25%), Positives = 108/283 (38%), Gaps = 59/283 (20%)

Query: 129 AYATLEDAAKAINASADLGVQATLVRSNGEVSLVLTSTESGTANA-FAHSLTGTAATTTT 187
           A A  E A K    +       T V + G +   L +  S  A    + S TG A T++ 
Sbjct: 21  ALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRSAIAKLNTSTSFTGLAGTSSD 80

Query: 188 LSTAADARIRMGGSFGVGGIELT----SSSNTFDNVIEGVSLSVNKVHKDGDPALTLTID 243
               A A +    S G   +E+T    SS  T D    GVS  VN     GDP  TLTI 
Sbjct: 81  -EKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVSSVVNN---SGDPQ-TLTIS 135

Query: 244 QDKS-----------------------ATKG-KAQSFVDAFNALMTSFDSLTASGSDSSA 279
           Q  +                        ++G  A    DA  + +    S T  GSD + 
Sbjct: 136 QSSADYNVTIPDGATLQQVRDLINKQLGSQGINANILTDAKGSRLVMSSSTTGEGSDIT- 194

Query: 280 RGALAGDSSV--------------RAIEG-RLNTLLRTDFGGNSLINFGISADRNGKLTI 324
              L+GDSS+                I+G  L +   T  G  S +NF + A+   +L++
Sbjct: 195 ---LSGDSSLVQNATPGAPAQNAKYTIDGLELESKSNTVTGAISGVNFELLAEGKSRLSV 251

Query: 325 --DTARFEAAVAKDPAGFEALFTGKDNLLDSIDKTVASYTSST 365
             +T   + +V    + + AL T     +++  K  A+  +ST
Sbjct: 252 ATNTTTLKTSVQSFVSAYNALITA----INTQTKVTATGDAST 290