Pairwise Alignments

Query, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 261 a.a., flagellar basal body rod protein FlgG from Pseudomonas simiae WCS417

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 25/172 (14%)

Query: 5   IALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAETQ----------------- 47
           +A TGLSA + QL TI NN+AN  T GFK  RT F  L  + +                 
Sbjct: 7   VAKTGLSAQDTQLTTISNNLANVSTTGFKRDRTEFQDLLYQIKRQPGAQSTQDSALPSGL 66

Query: 48  --AMGVEVIGTTQSISQGGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKD 105
               GV+++GT ++ S  G+L +T + LDLA++G GFF     +G  GYTR G F  + +
Sbjct: 67  QLGTGVQIVGTQKNFS-AGSLQTTGQPLDLAVNGRGFFQVLQPDGTTGYTRDGTFHLNAN 125

Query: 106 SYITNSLGQRLQGYPADAT-GNLQTGTVGDLQLRSGGIPARATDALSFVANL 156
             +  + G  L+  PA     N +T TVG  Q  +  I      A   + NL
Sbjct: 126 GQVVTASGFVLE--PAVVVPDNAKTFTVG--QDGTVSITVAGNSATQVIGNL 173



 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 286 SVEKDGKVYASYS-NGERMLQGQVVLASFVNAEGLKNISGTAWTETAASGAAMLGAPGVG 344
           +V +DG V  + + N    + G +  A F+N  GL+ I    + ETA+SGA  +G PG+ 
Sbjct: 150 TVGQDGTVSITVAGNSATQVIGNLQTADFINPAGLQAIGNNLFLETASSGAPQVGTPGLN 209

Query: 345 QYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQVISTNKELTQVL 392
            +GT    ALE+SNV   +++V ++  QR Y+ N++VIST  ++   L
Sbjct: 210 GFGTTLQRALETSNVSTVEEMVNMITTQRAYEMNSKVISTANQMLGAL 257