Pairwise Alignments

Query, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 440 a.a., Flagellar hook protein FlgE from Pseudomonas putida KT2440

 Score =  276 bits (707), Expect = 6e-79
 Identities = 168/437 (38%), Positives = 237/437 (54%), Gaps = 46/437 (10%)

Query: 1   MSFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAET---QAMGVEVIGT- 56
           MSFNI L+GL A N+ LN  GNNIAN  T GFKSSR  F   Y+ +    + G  VIGT 
Sbjct: 1   MSFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTG 60

Query: 57  --TQSISQ---GGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKDSYITNS 111
             T ++SQ    G + +T + LD+AI G GFF     NG   YTRAG F +DK  Y+ N+
Sbjct: 61  VKTAAVSQLFTPGNINATGQALDMAIDGNGFFALN-DNGSKIYTRAGAFYSDKAGYVVNA 119

Query: 112 LGQRLQGYPADATGNLQTGTVGDLQLRSGGIPARATDALSFVANLDANQEVPTVA-FDPL 170
            G  LQGY     G +  G + DLQ+ +  +  + T  ++   NL++    P+V  FDP 
Sbjct: 120 SGANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITEKINLNSAATSPSVTPFDPT 179

Query: 171 AADSYNSTYTTKLYDSQGKEHTLTQYFVK-TADNNWNAHYYVDG------AALAGAPQAL 223
            A SYN T+ T ++DSQG EH + QYF+K  A N W+ H  +DG      A+      A+
Sbjct: 180 NASSYNFTFNTPVFDSQGNEHQMNQYFIKDDATNTWSMHTTIDGRNPANPASTTPLVNAV 239

Query: 224 TFDTSGVL---ATPIGTVALAAPL------------------------TGGVAPL-AIQL 255
            F + G L   A   G VA    +                         G +A    ++L
Sbjct: 240 PFKSDGTLDKDAMTAGDVAGGLSIGEDKIFQLNDWIPAQKNAAGEWSANGAIANADGVKL 299

Query: 256 DYSGTSQYGSEFSVTNNRATGYAAGEQTGMSVEKDGKVYASYSNGERMLQGQVVLASFVN 315
           D  G +QY +  +       G+A GE +G+S++++G ++AS++NG+  + GQV +A+F N
Sbjct: 300 DMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNGYLFASFTNGKDKVIGQVAIANFAN 359

Query: 316 AEGLKNISGTAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNY 375
            +GL  I GT W E+ ASG  ++GAP  G  G ++ GALE SNVDLT +LV L++ Q NY
Sbjct: 360 LQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSNVDLTGELVNLIKAQSNY 419

Query: 376 QANTQVISTNKELTQVL 392
           QAN + IST   + Q +
Sbjct: 420 QANAKTISTESTIMQTI 436