Pairwise Alignments

Query, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 248 a.a., Flagellar basal-body rod protein FlgF from Variovorax sp. SCN45

 Score =  158 bits (400), Expect = 8e-44
 Identities = 92/246 (37%), Positives = 145/246 (58%), Gaps = 8/246 (3%)

Query: 1   MDRLGYTAMTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAVAVEGYGYDSRHMALIE 60
           +DR+ Y AM+ A + M    V +NN+ANV+TPGFRA +   +AV V G    +R      
Sbjct: 1   VDRMLYVAMSGAKQAMDQQAVVANNMANVSTPGFRAQIANFRAVPVVGQEAPTRAFVAAT 60

Query: 61  NNGVSLAAGPMVATGRELDFAVKGTGLIVLQ--DGEGEAYTRQGSMQVDAEGRL-TLNGR 117
             G     GP+  TGR LD AV G G +V+Q  DG GEAYTR G++Q+ A+G++ T+ GR
Sbjct: 61  TPGADFTHGPLTETGRALDVAVSGQGWLVVQTPDG-GEAYTRVGNLQISADGQITTMGGR 119

Query: 118 AVLGEGGPIVLPEYDRMEIGNDGTVSVMAPGDWMM---AEVDRIRLVDVPAANLMKNQAG 174
           AV+G+ G + +P    + I  +G V    P    +   AEV R++LV+ P A+L++   G
Sbjct: 120 AVMGDNGAMTVPPGSAVAIAPNGLVGARDPASGTLTGIAEVGRLKLVNPPNADLVRGDDG 179

Query: 175 LLVTRDG-EPAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSD 233
           L   R+G  PA+  E V + +G +E SNV+ ++ + + ++  R FE Q+K ++ A+  + 
Sbjct: 180 LFRMREGLPPAEADEAVTVVTGVVEGSNVNPVEAMVAMLANARSFEMQMKSLQTADTNAQ 239

Query: 234 AGNRMI 239
           A N+++
Sbjct: 240 AANKLL 245