Pairwise Alignments

Query, 282 a.a., Protein involved in catabolism of external DNA from Pseudomonas stutzeri RCH2

Subject, 304 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Rhodanobacter sp. FW510-T8

 Score =  234 bits (596), Expect = 2e-66
 Identities = 125/285 (43%), Positives = 177/285 (62%), Gaps = 3/285 (1%)

Query: 1   MNYRHAFHAGNHADVLKHLVLSRIFALLSRKEAPFAYLDSHAGVGLYDLAGDQASRTGEW 60
           MNYRHA+HAGN ADVLKH VL  +   +  K APF Y+D+HAG G Y L G +A +TGE 
Sbjct: 1   MNYRHAYHAGNFADVLKHTVLLALVEAMQAKPAPFCYIDTHAGSGDYPLEGFEAKKTGEH 60

Query: 61  LQGIARIWQAEAQPALLDDY-LGVIRELNPDGALRYYPGSPELARQLTREQDRLQLNEKH 119
             GIAR+  AE  P LL  +   +++    +  L++YPGSP    +L R  D  QL E H
Sbjct: 61  KDGIARLHPAEKVPPLLQRWRASILKGEGNEQGLKHYPGSPLQVTRLLRPGDSAQLCELH 120

Query: 120 PEDGALLKDNMAGDRRVAVHRGEGWFVPRALMPTQEKRVVLLIDPPFEQADELSRCV-TA 178
            E+   L++   G+ +V VH+ +G+   +AL+P +EKR ++LIDPP+E  +   R +  A
Sbjct: 121 AEEATKLRELFRGNPQVHVHQRDGYEALKALLPPKEKRGLVLIDPPYEAQEAEYRLIEQA 180

Query: 179 IKEALGRMRQTIGVIWYPIKDERQLKRFYQDLARSGAPKLLRAELFVHPADDSSRLSGSG 238
           +K AL R    +  +WYPIK   Q++ F + L  SG  ++LRAEL VHP D   RL+GSG
Sbjct: 181 LKSALLRWPTGVYAVWYPIKLRSQVQPFLRKLQHSGVKRILRAELLVHPDDSPLRLNGSG 240

Query: 239 LAIVNPPWGLEEELRELLPWLAEQLAQSQ-GSWRLDWLIEEGKAE 282
           + I+N PW L++ LRE L  LA  L+Q +   W+LDWL++E  ++
Sbjct: 241 MVILNAPWNLDDTLREPLRVLASLLSQDRPAEWKLDWLLDEAGSQ 285